RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ADMP35318 185 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 HOXA1P49639 335 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-204ENST00000462258 ERHP84090 104 aaKnown RBP7.64□□□□□ -1.19
SF3A3-204ENST00000462258 SURF2Q15527 256 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-204ENST00000462258 SP6Q3SY56 376 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 OR52B4Q8NGK2 314 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 PINX1Q96BK5 328 aaKnown RBP7.64□□□□□ -1.19
SF3A3-204ENST00000462258 CITED4Q96RK1 184 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 PRRT1Q99946 306 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 C20orf24Q9BUV8 137 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 NAA60Q9H7X0 242 aa7.64□□□□□ -1.19
SF3A3-204ENST00000462258 GAR1Q9NY12 217 aaKnown RBP7.64□□□□□ -1.19
SF3A3-204ENST00000462258 RYR2Q92736 4967 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 IGHV3OR16-8A0A075B7F1 116 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 TRAV25A0A0B4J276 109 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 A0A0B4J293 547 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 A0A0G2JRQ6 117 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 TEX13DA0A0J9YY54 714 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 ANKRD20A5PA0PJZ0 165 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 I3L2K1 104 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 NUPL2O15504 423 aaKnown RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 ST8SIA3O43173 380 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 GSTZ1O43708 216 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 MT-CO2P00403 227 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 IFNA17P01571 189 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 FCGR2BP31994 310 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 RELQ04864 619 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 RBPMS2Q6ZRY4 209 aaKnown RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 MCFD2Q8NI22 146 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 RRNAD1Q96FB5 475 aaKnown RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 TMEM222Q9H0R3 208 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 C5orf66Q9H5L9 145 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 RETNQ9HD89 108 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 RSL24D1Q9UHA3 163 aaKnown RBP7.63□□□□□ -1.19
SF3A3-204ENST00000462258 CSMD3Q7Z407 3707 aa7.63□□□□□ -1.19
SF3A3-204ENST00000462258 CCDC160A6NGH7 325 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 INS-IGF2F8WCM5 200 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 ZNF207O43670 478 aaKnown RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 GNG7O60262 68 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 IGHV3-48P01763 117 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 CTSGP08311 255 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 SNCAP37840 140 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 MFAP4P55083 255 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 ANKRD55Q3KP44 614 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 OR51S1Q8NGJ8 323 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 LHFPL5Q8TAF8 219 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 RBPMSQ93062 196 aaKnown RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 TXN2Q99757 166 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 SPAG8Q99932 426 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 RTBDNQ9BSG5 229 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 NXF2Q9GZY0 626 aaKnown RBP7.62□□□□□ -1.19
SF3A3-204ENST00000462258 EDA2RQ9HAV5 297 aa7.62□□□□□ -1.19
SF3A3-204ENST00000462258 RBMY1BA6NDE4 496 aaKnown RBP7.61□□□□□ -1.19
SF3A3-204ENST00000462258 RBMY1EA6NEQ0 496 aaKnown RBP7.61□□□□□ -1.19
SF3A3-204ENST00000462258 FABP12A6NFH5 140 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 CRYM-AS1A6NIL9 109 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 C15orf62A8K5M9 175 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 CORTO00230 105 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 TSPAN4O14817 238 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 YIF1AO95070 293 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 CDS2O95674 445 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 RBMY1DP0C7P1 496 aaKnown RBP7.61□□□□□ -1.19
SF3A3-204ENST00000462258 TNFSF8P32971 234 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 DHODHQ02127 395 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 CASC10Q5T4H9 136 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 FAM219AQ8IW50 185 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 ZNF414Q96IQ9 312 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 FAM110AQ9BQ89 295 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 HIPK2Q9H2X6 1198 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 ENY2Q9NPA8 101 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 MCUBQ9NWR8 336 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 SCP2D1Q9UJQ7 156 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 GPR132Q9UNW8 380 aa7.61□□□□□ -1.19
SF3A3-204ENST00000462258 K7EMT4 169 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 RNASE2P10153 161 aaKnown RBP7.6□□□□□ -1.19
SF3A3-204ENST00000462258 LYL1P12980 280 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 ETV6P41212 452 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 NPBWR1P48145 328 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3A3-204ENST00000462258 AARDQ4LEZ3 155 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 TMEM268Q5VZI3 342 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 LAMTOR1Q6IAA8 161 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 SELENOHQ8IZQ5 122 aaKnown RBP7.6□□□□□ -1.19
SF3A3-204ENST00000462258 DUSP18Q8NEJ0 188 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 GLYATL2Q8WU03 294 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 TRIM63Q969Q1 353 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 TMEM230Q96A57 120 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 OR10C1Q96KK4 312 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 GGTLC1Q9BX51 225 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 CACNG5Q9UF02 275 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 UBQLN2Q9UHD9 624 aa7.6□□□□□ -1.19
SF3A3-204ENST00000462258 LYSTQ99698 3801 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 IGHV7-4-1A0A0J9YVY3 117 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 OR4C46A6NHA9 309 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 FAUP35544 74 aaKnown RBP7.59□□□□□ -1.19
SF3A3-204ENST00000462258 OPRK1P41145 380 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 SPCS3P61009 180 aa7.59□□□□□ -1.19
SF3A3-204ENST00000462258 BSXQ3C1V8 233 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms