RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 U3KQ87 197 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 COL6A5A8TX70 2615 aa7.92□□□□□ -1.14
UPF2-204ENST00000460569 TENM1Q9UKZ4 2725 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 FBN1P35555 2871 aaKnown RBP7.91□□□□□ -1.14
UPF2-204ENST00000460569 IGHV3-21A0A0B4J1V1 117 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 A0A0G2JLM5 398 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 C15orf62A8K5M9 175 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 NUDT19A8MXV4 375 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 CORTO00230 105 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 TSC22D2O75157 780 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 DEDDO75618 318 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 NDUFB8O95169 186 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 TMEM50AO95807 157 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 IGHV3-11P01762 117 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 RLN2P04090 185 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 IFNA4P05014 189 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 OR8U8P0C7N1 319 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 OPRK1P41145 380 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 BCAP31P51572 246 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 CAV2P51636 162 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 PAX9P55771 341 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 TAS2R30P59541 319 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 RAB11AP62491 216 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 ATP5G2Q06055 141 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 EXOSC2Q13868 293 aaKnown RBP7.91□□□□□ -1.14
UPF2-204ENST00000460569 KLHL30-AS1Q8NEE0 82 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 MYOZ3Q8TDC0 251 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 TMEM170AQ8WVE7 144 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 SMIM8Q96KF7 97 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 OR5B12Q96R08 314 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 CITED1Q99966 193 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 TSSC4Q9Y5U2 329 aaPredicted RBP7.91□□□□□ -1.14
UPF2-204ENST00000460569 S4R3C0 116 aa7.91□□□□□ -1.14
UPF2-204ENST00000460569 MFSD2BA6NFX1 497 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 MPC2O95563 127 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 MT-CO2P00403 227 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 IGHV3-23P01764 117 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 ATP5IP56385 69 aaPredicted RBP7.9□□□□□ -1.14
UPF2-204ENST00000460569 KLK9Q2XQG4 91 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 NSUN5P1Q3KNT7 163 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 PRSS54Q6PEW0 395 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 C18orf65Q6ZTR6 163 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 NDUFA11Q86Y39 141 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 ZNF491Q8N8L2 437 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 OR2T35Q8NGX2 323 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 THAP6Q8TBB0 222 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
UPF2-204ENST00000460569 CHAC2Q8WUX2 184 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 UBE2E2Q96LR5 201 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 ZNF747Q9BV97 191 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 C11orf1Q9H5F2 150 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 GNB4Q9HAV0 340 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 OR5AC2Q9NZP5 309 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 MBD2Q9UBB5 411 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 KLK9Q9UKQ9 250 aa7.9□□□□□ -1.14
UPF2-204ENST00000460569 STAB1Q9NY15 2570 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 TRAV14DV4A0A0A6YYC5 116 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 FAM24AA6NFZ4 105 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 E5RGE8 158 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 H0YIZ8 118 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 I3L2K1 104 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 K7EIM0 57 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 IGHV3-48P01763 117 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 LGALS1P09382 135 aaKnown RBP7.89□□□□□ -1.15
UPF2-204ENST00000460569 METTL15P1P0C7V9 234 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 CDX1P47902 265 aaPredicted RBP7.89□□□□□ -1.15
UPF2-204ENST00000460569 FGL1Q08830 312 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 KIAA0141Q14154 515 aaPredicted RBP7.89□□□□□ -1.15
UPF2-204ENST00000460569 KRTAP21-3Q3LHN1 58 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 PVRIGQ6DKI7 326 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 OR8G2PQ6IF36 304 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 ETV3LQ6ZN32 361 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 C4orf3Q8WVX3 66 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 DCUN1D4Q92564 292 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 EEF1AKMT3Q96AZ1 226 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 CXorf58Q96LI9 332 aa7.89□□□□□ -1.15
UPF2-204ENST00000460569 RANGRFQ9HD47 186 aaPredicted RBP7.89□□□□□ -1.15
UPF2-204ENST00000460569 LYRM2Q9NU23 88 aaPredicted RBP7.89□□□□□ -1.15
UPF2-204ENST00000460569 IGSF23A1L1A6 192 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 CCNKO75909 580 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 DEFB136Q30KP8 78 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 Q56UQ5 140 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 ACSM6Q6P461 480 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 SHISA2Q6UWI4 295 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 TMEM14EPQ6UXP3 125 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 C8orf86Q6ZUL3 223 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 SLC16A13Q7RTY0 426 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 AKAP14Q86UN6 197 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 STX12Q86Y82 276 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 UBAC2Q8NBM4 344 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 VN1R17PQ8TDU5 208 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 SCARB1Q8WTV0 552 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 CCDC140Q96MF4 163 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 RNF126Q9BV68 326 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 FNDC4Q9H6D8 234 aaPredicted RBP7.88□□□□□ -1.15
UPF2-204ENST00000460569 C21orf62Q9NYP8 219 aa7.88□□□□□ -1.15
UPF2-204ENST00000460569 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms