RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 C15orf62A8K5M9 175 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 B9A039 149 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 OR2J3O76001 311 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 BMI1P35226 326 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 RELBQ01201 579 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 METRNQ9UJH8 293 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 RIF1Q5UIP0 2472 aaKnown RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 CCL21O00585 134 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 MFAP4P55083 255 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 SRSF12Q8WXF0 261 aaKnown RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 H3BTX0 84 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 MLNRO43193 412 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 TCF21O43680 179 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 PPOXP50336 477 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 GOLT1AQ6ZVE7 132 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 KCNS1Q96KK3 526 aa13.79□□□□□ -0.2
TCOF1-206ENST00000445265 RNASE7Q9H1E1 156 aaKnown RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 RPUSD1Q9UJJ7 312 aaKnown RBP13.79□□□□□ -0.2
TCOF1-206ENST00000445265 F2RL2O00254 374 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 BTF3P20290 206 aaKnown RBP13.78□□□□□ -0.2
TCOF1-206ENST00000445265 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 A6NDN8 102 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-206ENST00000445265 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 SOX21Q9Y651 276 aaPredicted RBP13.78□□□□□ -0.2
TCOF1-206ENST00000445265 C9JCJ5 164 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 CTAG1AP78358 180 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 MGST2Q99735 147 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 UFC1Q9Y3C8 167 aa13.78□□□□□ -0.2
TCOF1-206ENST00000445265 SIAH2O43255 324 aa13.77□□□□□ -0.2
TCOF1-206ENST00000445265 CCL3L1P16619 93 aa13.77□□□□□ -0.2
TCOF1-206ENST00000445265 LMO1P25800 156 aa13.77□□□□□ -0.2
TCOF1-206ENST00000445265 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.2
TCOF1-206ENST00000445265 GPR6P46095 362 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-206ENST00000445265 ACTL10Q5JWF8 245 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 GTF2H5Q6ZYL4 71 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 GPR82Q96P67 336 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 LIPFP07098 398 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 SLC25A34Q6PIV7 304 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 MIEN1Q9BRT3 115 aa13.77□□□□□ -0.21
TCOF1-206ENST00000445265 GFRA3O60609 400 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 TMEM116Q8NCL8 245 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 IGKV1-39P01597 117 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 IGHG3P01860 377 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 IGKV1D-39P04432 117 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 RPL7P18124 248 aaKnown RBP13.76□□□□□ -0.21
TCOF1-206ENST00000445265 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-206ENST00000445265 TMEM70Q9BUB7 260 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 NRN1Q9NPD7 142 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 IGKV3-15P01624 115 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 BSPH1Q075Z2 132 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 DERL1Q9BUN8 251 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 C2orf83Q53S99 150 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 ATOH7Q8N100 152 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 SLC25A15Q9Y619 301 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 LY96Q9Y6Y9 160 aa13.76□□□□□ -0.21
TCOF1-206ENST00000445265 FMC1Q96HJ9 113 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 KLF2Q9Y5W3 355 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-206ENST00000445265 IGHV1-46P01743 117 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 HLA-DRB1P01911 266 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 RPS20P60866 119 aaKnown RBP13.75□□□□□ -0.21
TCOF1-206ENST00000445265 RPP21Q9H633 154 aaKnown RBP13.75□□□□□ -0.21
TCOF1-206ENST00000445265 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-206ENST00000445265 ERVK11-1P61568 191 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 PSG9Q00887 426 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 ECSCRQ19T08 205 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 PNKDQ8N490 385 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 SEPSECSQ9HD40 501 aaKnown RBP13.75□□□□□ -0.21
TCOF1-206ENST00000445265 LOC389332A0A1B0GUA5 103 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 TCRBV4S1A1TA0A5B7 111 aa13.75□□□□□ -0.21
TCOF1-206ENST00000445265 PFN1P07737 140 aaKnown RBP13.74□□□□□ -0.21
TCOF1-206ENST00000445265 SELLP14151 372 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
TCOF1-206ENST00000445265 RNF224P0DH78 156 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 CKS2P33552 79 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 ARF6P62330 175 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 TWIST1Q15672 202 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 MUC15Q8N387 334 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 IL4P05112 153 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 ZNF788Q6ZQV5 615 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 COL25A1Q9BXS0 654 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-206ENST00000445265 FBXL15Q9H469 300 aa13.74□□□□□ -0.21
TCOF1-206ENST00000445265 ACACAQ13085 2346 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 ZNF503-AS2A6NEH8 195 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 M0QZ24 198 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 AREGP15514 252 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 WNT10AQ9GZT5 417 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 UCNP55089 124 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 OR10J3Q5JRS4 329 aa13.73□□□□□ -0.21
TCOF1-206ENST00000445265 RNFT1Q5M7Z0 435 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 708.4 ms