RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LMO4P61968 165 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 LCN2P80188 198 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 MMDQ15546 238 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 OR1P1Q8NH06 330 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
SNX13-204ENST00000444712 TOX4O94842 621 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 NDUFA3O95167 84 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 SELENOTP62341 195 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 LDLRAD2Q5SZI1 272 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 PRELID1Q9Y255 219 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 POLR3KQ9Y2Y1 108 aaPredicted RBP12.55□□□□□ -0.4
SNX13-204ENST00000444712 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
SNX13-204ENST00000444712 ZNF727A8MUV8 499 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 F6UZH7 168 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 PAGE4O60829 102 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 EIF3GO75821 320 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNX13-204ENST00000444712 TAS2R45P59539 299 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 GNB1P62873 340 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 THAP8Q8NA92 274 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 OR4F5Q8NH21 305 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
SNX13-204ENST00000444712 ACY3Q96HD9 319 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 OR4F4Q96R69 305 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
SNX13-204ENST00000444712 LPAR2Q9HBW0 351 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
SNX13-204ENST00000444712 ARHGAP32A7KAX9 2087 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 IGKV1OR2-108A0A075B7D4 117 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 C11orf94C9JXX5 98 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 DEFA4P12838 97 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 UBE2E1P51965 193 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 OR1L6Q8NGR2 347 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 NAT8Q9UHE5 227 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
SNX13-204ENST00000444712 CLN5O75503 358 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 FAM78BQ5VT40 261 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 FAM168AQ92567 244 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 EAF1Q96JC9 268 aaPredicted RBP12.54□□□□□ -0.4
SNX13-204ENST00000444712 PFDN5Q99471 154 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 SMIM7Q9BQ49 75 aa12.54□□□□□ -0.4
SNX13-204ENST00000444712 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
SNX13-204ENST00000444712 TECRQ9NZ01 308 aaKnown RBP12.54□□□□□ -0.4
SNX13-204ENST00000444712 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 CNIH1O95406 144 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 CRYGCP07315 174 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 OR5G3P0C626 314 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 AKR1C3P42330 323 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 HES1Q14469 280 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 SSX2Q16385 188 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 OR2T6Q8NHC8 308 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 MALSU1Q96EH3 234 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 TMEM167BQ9NRX6 74 aa12.53□□□□□ -0.4
SNX13-204ENST00000444712 SMG1Q96Q15 3661 aaKnown RBP12.53□□□□□ -0.4
SNX13-204ENST00000444712 MT-ND4LP03901 98 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 REG1AP05451 166 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 GCHFRP30047 84 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 BPIFB3P59826 476 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 EBI3Q14213 229 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 MLANAQ16655 118 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 CLEC2AQ6UVW9 174 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 MISP3Q96FF7 219 aa12.52□□□□□ -0.4
SNX13-204ENST00000444712 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.4
SNX13-204ENST00000444712 LOC105371267A0A1B0GV96 52 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 COLCA2A8K830 154 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 AREGP15514 252 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 CST9LP1Q5W188 147 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
SNX13-204ENST00000444712 RELNP78509 3460 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 OR2C1O95371 312 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 FOLR2P14207 255 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 RNF212Q495C1 297 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 TMEM116Q8NCL8 245 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 PARLQ9H300 379 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 TMEM242Q9NWH2 141 aa12.51□□□□□ -0.41
SNX13-204ENST00000444712 A0A1W2PRD5 423 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 A0A1W2PRF3 423 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 A0A1W2PRM7 423 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 BRS3P32247 399 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 RND2P52198 227 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 RPUSD4Q96CM3 377 aaKnown RBP12.5□□□□□ -0.41
SNX13-204ENST00000444712 TBX15Q96SF7 602 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 TRGV9Q99603 122 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 C1RLQ9NZP8 487 aa12.5□□□□□ -0.41
SNX13-204ENST00000444712 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms