RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 VWA1Q6PCB0 445 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 C5orf17Q8NAS9 161 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 OR4S2Q8NH73 311 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 OSTCQ9NRP0 149 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 LGALS7P47929 136 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 NHLH1Q02575 133 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 PIEZO2Q9H5I5 2752 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 P0C879 139 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 HOXC12P31275 282 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 CAMPP49913 170 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 RBPJQ06330 500 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 C5orf30Q96GV9 206 aa13.85□□□□□ -0.19
PMS1-213ENST00000441310 NBEAQ8NFP9 2946 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 RHBDL1O75783 438 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 APOA2P02652 100 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 ARF6P62330 175 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 FOXE3Q13461 319 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 EFNB3Q15768 340 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 KRTAP27-1Q3LI81 207 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 COMMD5Q9GZQ3 224 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 TIMM8BQ9Y5J9 83 aaPredicted RBP13.84□□□□□ -0.19
PMS1-213ENST00000441310 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 ACACAQ13085 2346 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 KLRC4-KLRK1H3BQV0 150 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 MT-CO2P00403 227 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 PPOXP50336 477 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 GDF5OSQ5U4N7 250 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 SLC25A40Q8TBP6 338 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 PMCHL2Q9BQD1 86 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 SAP30LQ9HAJ7 183 aa13.84□□□□□ -0.19
PMS1-213ENST00000441310 IGHV3-64DA0A0J9YX35 117 aa13.83□□□□□ -0.19
PMS1-213ENST00000441310 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.19
PMS1-213ENST00000441310 NPIPB11E5RHQ5 1161 aa13.83□□□□□ -0.19
PMS1-213ENST00000441310 AP1S3Q96PC3 154 aa13.83□□□□□ -0.19
PMS1-213ENST00000441310 KLF13Q9Y2Y9 288 aaPredicted RBP13.83□□□□□ -0.19
PMS1-213ENST00000441310 OR10J4P0C629 311 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 FTH1P19P0C7X4 201 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 BRWD1-AS2P59051 145 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 PSG5Q15238 335 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 ZNF766Q5HY98 468 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 CADP27708 2225 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 CUL9Q8IWT3 2517 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 AKAP13Q12802 2813 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 SMIM27A0A1W2PRY6 76 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 MDS2Q8NDY4 140 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 C1QTNF5Q9BXJ0 243 aa13.83□□□□□ -0.2
PMS1-213ENST00000441310 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.2
PMS1-213ENST00000441310 WT1P19544 449 aaPredicted RBP13.82□□□□□ -0.2
PMS1-213ENST00000441310 SPENQ96T58 3664 aaKnown RBP13.82□□□□□ -0.2
PMS1-213ENST00000441310 IGKV3D-15A0A087WSY6 115 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 J3QR06 171 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 MIR17HGQ75NE6 70 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 ZNF645Q8N7E2 425 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 SPRR3Q9UBC9 169 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 SH3BGRL2Q9UJC5 107 aa13.82□□□□□ -0.2
PMS1-213ENST00000441310 SYS1-DBNDD2H3BUS1 97 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 CATR1Q13166 79 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 ISLRO14498 428 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 MPDU1O75352 247 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 HAND1O96004 215 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 CD24P25063 80 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 GPR183P32249 361 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 FOXA3P55318 350 aaPredicted RBP13.81□□□□□ -0.2
PMS1-213ENST00000441310 GTF2H5Q6ZYL4 71 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 ABHD12Q8N2K0 398 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 NPVFQ9HCQ7 196 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 CDIPTO14735 213 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 SSX8Q7RTT4 187 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 OR52E5Q8NH55 327 aa13.81□□□□□ -0.2
PMS1-213ENST00000441310 TRGV5A0A0B4J1U4 118 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 HIST1H1AQ02539 215 aaPredicted RBP13.8□□□□□ -0.2
PMS1-213ENST00000441310 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 SCRT2Q9NQ03 307 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 APC2O95996 2303 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 H3BUT2 72 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 URB1-AS1Q96HZ7 61 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 ROS1P08922 2347 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 PCNX1Q96RV3 2341 aa13.8□□□□□ -0.2
PMS1-213ENST00000441310 PRDM14Q9GZV8 571 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 TMEM191AQ9H0A3 160 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 GTSF1LQ9H1H1 148 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 CEP295Q9C0D2 2601 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 TNRC6AQ8NDV7 1962 aaKnown RBP13.79□□□□□ -0.2
PMS1-213ENST00000441310 OR2H2O95918 312 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 IGLV2-8P01709 118 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 UFSP1Q6NVU6 142 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 AHRRA9YTQ3 701 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 LEPROTL1O95214 131 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 HTR1DP28221 377 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 APOBEC3AP31941 199 aaPredicted RBP13.79□□□□□ -0.2
PMS1-213ENST00000441310 FAM120AOSQ5T036 256 aa13.79□□□□□ -0.2
PMS1-213ENST00000441310 INTS1Q8N201 2190 aaKnown RBP13.78□□□□□ -0.2
PMS1-213ENST00000441310 SMAGPQ0VAQ4 97 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 Q6P435 159 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 ZNF497Q6ZNH5 498 aa13.78□□□□□ -0.2
PMS1-213ENST00000441310 MOB1BQ7L9L4 216 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms