RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 IFI27L2Q9H2X8 130 aa11□□□□□ -0.65
SPG11-202ENST00000427534 Q9H3A6 140 aa11□□□□□ -0.65
SPG11-202ENST00000427534 PTPRFP10586 1907 aa11□□□□□ -0.65
SPG11-202ENST00000427534 RALGAPA1Q6GYQ0 2036 aa11□□□□□ -0.65
SPG11-202ENST00000427534 TRAV14DV4A0A0A6YYC5 116 aa11□□□□□ -0.65
SPG11-202ENST00000427534 A0A0G2JNJ9 132 aa11□□□□□ -0.65
SPG11-202ENST00000427534 CXorf65A6NEN9 183 aa11□□□□□ -0.65
SPG11-202ENST00000427534 NBR2O15453 112 aa11□□□□□ -0.65
SPG11-202ENST00000427534 TSPAN13O95857 204 aa11□□□□□ -0.65
SPG11-202ENST00000427534 Q9UFV3 132 aa11□□□□□ -0.65
SPG11-202ENST00000427534 PSME4Q14997 1843 aa11□□□□□ -0.65
SPG11-202ENST00000427534 PRB1P04280 392 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 LINC00114Q6XXX2 140 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 SCGB3A1Q96QR1 104 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 PYYP10082 97 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
SPG11-202ENST00000427534 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 OR11H4Q8NGC9 324 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 TRBV7-9A0A0J9YWB2 115 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 DNAL4O96015 105 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 GATA4P43694 442 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 TMEM95Q3KNT9 176 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 ACTL10Q5JWF8 245 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 CYB5R2Q6BCY4 276 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 C2orf88Q9BSF0 95 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 J3QW42 95 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 ZNF672Q499Z4 452 aaPredicted RBP10.99□□□□□ -0.65
SPG11-202ENST00000427534 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
SPG11-202ENST00000427534 NPIPB7O75200 414 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 ZNF883P0CG24 379 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 AGAP20933 346 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 NPCDR1Q9BY65 106 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 CFDP00746 253 aaPredicted RBP10.98□□□□□ -0.65
SPG11-202ENST00000427534 PAQR4Q8N4S7 273 aaPredicted RBP10.98□□□□□ -0.65
SPG11-202ENST00000427534 APOMO95445 188 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
SPG11-202ENST00000427534 H3BUX3 64 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 FAM19A2Q8N3H0 131 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 RPRMQ9NS64 109 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 CBY1Q9Y3M2 126 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 VENTXO95231 258 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 IGHV1-46P01743 117 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 MYOD1P15172 320 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 OR52E5Q8NH55 327 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 Q96MF0 132 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 SDHCQ99643 169 aaPredicted RBP10.98□□□□□ -0.65
SPG11-202ENST00000427534 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 LYZL4Q96KX0 146 aa10.98□□□□□ -0.65
SPG11-202ENST00000427534 BRCA1P38398 1863 aaKnown RBP10.97□□□□□ -0.65
SPG11-202ENST00000427534 IGKV2-40A0A087WW87 121 aaPredicted RBP10.97□□□□□ -0.65
SPG11-202ENST00000427534 IGKV2D-40P01614 121 aaPredicted RBP10.97□□□□□ -0.65
SPG11-202ENST00000427534 TYMSP04818 313 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 GZMBP10144 247 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 UCP3P55916 312 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 ZNF506Q5JVG8 444 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 POC1AQ8NBT0 407 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 GATAD1Q8WUU5 269 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 IMMP1LQ96LU5 166 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 ALKBH7Q9BT30 221 aaPredicted RBP10.97□□□□□ -0.65
SPG11-202ENST00000427534 FAM166AQ6J272 317 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 OR10S1Q8NGN2 331 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 PRELID3AQ96N28 172 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
SPG11-202ENST00000427534 LINC00205P59089 165 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 ESPL1Q14674 2120 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 CACNA1IQ9P0X4 2223 aa10.97□□□□□ -0.65
SPG11-202ENST00000427534 SEC16AO15027 2179 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 TCF24Q7RTU0 167 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 OR10J3Q5JRS4 329 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 PUSL1Q8N0Z8 303 aaKnown RBP10.96□□□□□ -0.65
SPG11-202ENST00000427534 ERVH48-1M5A8F1 160 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
SPG11-202ENST00000427534 C14orf144Q96I85 54 aa10.96□□□□□ -0.65
SPG11-202ENST00000427534 DOCK6Q96HP0 2047 aa10.96□□□□□ -0.66
SPG11-202ENST00000427534 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.66
SPG11-202ENST00000427534 A6NJY4 79 aa10.96□□□□□ -0.66
SPG11-202ENST00000427534 CDX1P47902 265 aaPredicted RBP10.96□□□□□ -0.66
SPG11-202ENST00000427534 RTTNQ86VV8 2226 aa10.96□□□□□ -0.66
SPG11-202ENST00000427534 TCF23Q7RTU1 214 aa10.96□□□□□ -0.66
SPG11-202ENST00000427534 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 WNT2P09544 360 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 SMIM6P0DI80 62 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 LEPP41159 167 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 IFITM2Q01629 132 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 TMEM133Q9H2Q1 129 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
SPG11-202ENST00000427534 COL8A2P25067 703 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 FLVCR1-AS1Q8TAF5 88 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 ZNRD1Q9P1U0 126 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 FAM209AQ5JX71 171 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 C12orf54Q6X4T0 127 aa10.95□□□□□ -0.66
SPG11-202ENST00000427534 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms