RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MISP3Q96FF7 219 aa15.34■□□□□ 0.05
GTF3A-202ENST00000419181 CHRDL1Q9BU40 450 aa15.34■□□□□ 0.05
GTF3A-202ENST00000419181 PDCD10Q9BUL8 212 aa15.34■□□□□ 0.05
GTF3A-202ENST00000419181 TMEM56-RWDD3S4R434 201 aa15.34■□□□□ 0.05
GTF3A-202ENST00000419181 ZNF785A8K8V0 405 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 FCGR2BP31994 310 aaPredicted RBP15.33■□□□□ 0.04
GTF3A-202ENST00000419181 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.04
GTF3A-202ENST00000419181 TM4SF20Q53R12 229 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 Q56UQ5 140 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 SPANXN2Q5MJ10 180 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 UBAC2Q8NBM4 344 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 DEDD2Q8WXF8 326 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 PALMDQ9NP74 551 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 C19orf73Q9NVV2 129 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 MLXQ9UH92 298 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 UFC1Q9Y3C8 167 aa15.33■□□□□ 0.04
GTF3A-202ENST00000419181 MT-CO2P00403 227 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 C8orf88P0DMB2 117 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 SNCAP37840 140 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 SUPT4H1P63272 117 aaKnown RBP15.32■□□□□ 0.04
GTF3A-202ENST00000419181 TMEM187Q14656 261 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 PVRIGQ6DKI7 326 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 UXS1Q8NBZ7 420 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 MARC2Q969Z3 335 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 SRRQ9GZT4 340 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.32■□□□□ 0.04
GTF3A-202ENST00000419181 GAR1Q9NY12 217 aaKnown RBP15.32■□□□□ 0.04
GTF3A-202ENST00000419181 KCNIP3Q9Y2W7 256 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 U3KQK5 164 aa15.32■□□□□ 0.04
GTF3A-202ENST00000419181 NDUFA4O00483 81 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 CTSGP08311 255 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 AKR1C4P17516 323 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 HOXA1P49639 335 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-202ENST00000419181 OR52E5Q8NH55 327 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 GPR146Q96CH1 333 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 WDR89Q96FK6 387 aaPredicted RBP15.31■□□□□ 0.04
GTF3A-202ENST00000419181 WWC2-AS2Q96NR7 200 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 TXN2Q99757 166 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 PRR13Q9NZ81 148 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 CACNG5Q9UF02 275 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 TENM3Q9P273 2699 aa15.31■□□□□ 0.04
GTF3A-202ENST00000419181 RNASE2P10153 161 aaKnown RBP15.3■□□□□ 0.04
GTF3A-202ENST00000419181 MFAP4P55083 255 aa15.3■□□□□ 0.04
GTF3A-202ENST00000419181 SPCS3P61009 180 aa15.3■□□□□ 0.04
GTF3A-202ENST00000419181 ZNF57Q68EA5 555 aaPredicted RBP15.3■□□□□ 0.04
GTF3A-202ENST00000419181 TMEM61Q8N0U2 210 aa15.3■□□□□ 0.04
GTF3A-202ENST00000419181 PINX1Q96BK5 328 aaKnown RBP15.3■□□□□ 0.04
GTF3A-202ENST00000419181 ZNF414Q96IQ9 312 aa15.3■□□□□ 0.04
GTF3A-202ENST00000419181 DAZ1Q9NQZ3 744 aaKnown RBP15.3■□□□□ 0.04
GTF3A-202ENST00000419181 MRPL27Q9P0M9 148 aaKnown RBP15.3■□□□□ 0.04
GTF3A-202ENST00000419181 SELENOKQ9Y6D0 94 aa15.3■□□□□ 0.04
GTF3A-202ENST00000419181 IGHV3-48P01763 117 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 CD81P60033 236 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 GUCA2BQ16661 112 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 BSXQ3C1V8 233 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 BTNL8Q6UX41 500 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 ENY2Q9NPA8 101 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 NDUFA13Q9P0J0 144 aa15.29■□□□□ 0.04
GTF3A-202ENST00000419181 HUWE1Q7Z6Z7 4374 aaKnown RBP15.29■□□□□ 0.04
GTF3A-202ENST00000419181 A0A0B4J2A0 478 aa15.28■□□□□ 0.04
GTF3A-202ENST00000419181 NUPL2O15504 423 aaKnown RBP15.28■□□□□ 0.04
GTF3A-202ENST00000419181 SUB1P53999 127 aaKnown RBP eCLIP15.28■□□□□ 0.04
GTF3A-202ENST00000419181 SLC25A21Q9BQT8 299 aaPredicted RBP15.28■□□□□ 0.04
GTF3A-202ENST00000419181 NEURL2Q9BR09 285 aa15.28■□□□□ 0.04
GTF3A-202ENST00000419181 SHPKQ9UHJ6 478 aa15.28■□□□□ 0.04
GTF3A-202ENST00000419181 CORTO00230 105 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 CD7P09564 240 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 ANXA3P12429 323 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 SRPXP78539 464 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 RELQ04864 619 aaPredicted RBP15.27■□□□□ 0.04
GTF3A-202ENST00000419181 NMSQ5H8A3 153 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 TMED4Q7Z7H5 227 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 C20orf24Q9BUV8 137 aa15.27■□□□□ 0.04
GTF3A-202ENST00000419181 C15orf62A8K5M9 175 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 K7EMT4 169 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 GNG7O60262 68 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 SULT1A3P0DMM9 295 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 SULT1A4P0DMN0 295 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 BAK1Q16611 211 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 TMEM128Q5BJH2 165 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 LYZL2Q7Z4W2 148 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 LGI3Q8N145 548 aa15.26■□□□□ 0.03
GTF3A-202ENST00000419181 IGHV3OR16-8A0A075B7F1 116 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 TRAV25A0A0B4J276 109 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 SCAF4O95104 1147 aaKnown RBP15.25■□□□□ 0.03
GTF3A-202ENST00000419181 NPBWR1P48145 328 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 DUSP18Q8NEJ0 188 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 SDHCQ99643 169 aaPredicted RBP15.25■□□□□ 0.03
GTF3A-202ENST00000419181 TM2D3Q9BRN9 247 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 FNDC4Q9H6D8 234 aaPredicted RBP15.25■□□□□ 0.03
GTF3A-202ENST00000419181 CACFD1Q9UGQ2 172 aa15.25■□□□□ 0.03
GTF3A-202ENST00000419181 HTR2BP41595 481 aa15.24■□□□□ 0.03
GTF3A-202ENST00000419181 TRIQKQ629K1 86 aa15.24■□□□□ 0.03
GTF3A-202ENST00000419181 OR10C1Q96KK4 312 aa15.24■□□□□ 0.03
GTF3A-202ENST00000419181 RCHY1Q96PM5 261 aa15.24■□□□□ 0.03
GTF3A-202ENST00000419181 TUBA4BQ9H853 241 aa15.24■□□□□ 0.03
GTF3A-202ENST00000419181 HEYLQ9NQ87 328 aaPredicted RBP15.24■□□□□ 0.03
GTF3A-202ENST00000419181 PIGBOS1A0A0B4J2F0 54 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 CEBPZOSA8MTT3 80 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms