RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 ERHP84090 104 aaKnown RBP19.76■□□□□ 0.75
VEGFA-207ENST00000413642 SURF2Q15527 256 aaPredicted RBP19.76■□□□□ 0.75
VEGFA-207ENST00000413642 PINX1Q96BK5 328 aaKnown RBP19.76■□□□□ 0.75
VEGFA-207ENST00000413642 MRPL27Q9P0M9 148 aaKnown RBP19.76■□□□□ 0.75
VEGFA-207ENST00000413642 ATG12O94817 140 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 CDS2O95674 445 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 ELLP55199 621 aaPredicted RBP19.75■□□□□ 0.75
VEGFA-207ENST00000413642 SPSB3Q6PJ21 355 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 SLC35G3Q8N808 338 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 RNASE11Q8TAA1 199 aaKnown RBP19.75■□□□□ 0.75
VEGFA-207ENST00000413642 PRRT1Q99946 306 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 C20orf24Q9BUV8 137 aa19.75■□□□□ 0.75
VEGFA-207ENST00000413642 LINC00322Q6ZN03 302 aaPredicted RBP19.74■□□□□ 0.75
VEGFA-207ENST00000413642 SELENOHQ8IZQ5 122 aaKnown RBP19.74■□□□□ 0.75
VEGFA-207ENST00000413642 MARC2Q969Z3 335 aa19.74■□□□□ 0.75
VEGFA-207ENST00000413642 TMEM230Q96A57 120 aa19.74■□□□□ 0.75
VEGFA-207ENST00000413642 RRNAD1Q96FB5 475 aaKnown RBP19.74■□□□□ 0.75
VEGFA-207ENST00000413642 ATP6V0BQ99437 205 aa19.74■□□□□ 0.75
VEGFA-207ENST00000413642 RBM38Q9H0Z9 239 aaKnown RBP19.74■□□□□ 0.75
VEGFA-207ENST00000413642 PRR13Q9NZ81 148 aa19.74■□□□□ 0.75
VEGFA-207ENST00000413642 CRYM-AS1A6NIL9 109 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 OR11H12B2RN74 326 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 NDUFA4O00483 81 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 B3GALNT1O75752 331 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 MFAP4P55083 255 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 MCUBQ9NWR8 336 aa19.73■□□□□ 0.75
VEGFA-207ENST00000413642 RBMY1BA6NDE4 496 aaKnown RBP19.72■□□□□ 0.75
VEGFA-207ENST00000413642 RBMY1EA6NEQ0 496 aaKnown RBP19.72■□□□□ 0.75
VEGFA-207ENST00000413642 RBMY1DP0C7P1 496 aaKnown RBP19.72■□□□□ 0.75
VEGFA-207ENST00000413642 GPR146Q96CH1 333 aa19.72■□□□□ 0.75
VEGFA-207ENST00000413642 SRD5A3Q9H8P0 318 aa19.72■□□□□ 0.75
VEGFA-207ENST00000413642 V9GYH0 126 aa19.72■□□□□ 0.75
VEGFA-207ENST00000413642 RNASE2P10153 161 aaKnown RBP19.71■□□□□ 0.75
VEGFA-207ENST00000413642 SNCAP37840 140 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 HOXA1P49639 335 aaPredicted RBP19.71■□□□□ 0.75
VEGFA-207ENST00000413642 DHODHQ02127 395 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 TMEM268Q5VZI3 342 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 OR52B4Q8NGK2 314 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 PDCD10Q9BUL8 212 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 RETNQ9HD89 108 aa19.71■□□□□ 0.75
VEGFA-207ENST00000413642 DAZ1Q9NQZ3 744 aaKnown RBP19.71■□□□□ 0.75
VEGFA-207ENST00000413642 TENM3Q9P273 2699 aa19.7■□□□□ 0.74
VEGFA-207ENST00000413642 INS-IGF2F8WCM5 200 aa19.7■□□□□ 0.74
VEGFA-207ENST00000413642 PYDC2Q56P42 97 aa19.7■□□□□ 0.74
VEGFA-207ENST00000413642 RBPMS2Q6ZRY4 209 aaKnown RBP19.7■□□□□ 0.74
VEGFA-207ENST00000413642 RBPMSQ93062 196 aaKnown RBP19.7■□□□□ 0.74
VEGFA-207ENST00000413642 SCP2D1Q9UJQ7 156 aa19.7■□□□□ 0.74
VEGFA-207ENST00000413642 STAB2Q8WWQ8 2551 aa19.7■□□□□ 0.74
VEGFA-207ENST00000413642 NUPL2O15504 423 aaKnown RBP19.69■□□□□ 0.74
VEGFA-207ENST00000413642 KLF9Q13886 244 aaPredicted RBP19.69■□□□□ 0.74
VEGFA-207ENST00000413642 SLC16A13Q7RTY0 426 aa19.69■□□□□ 0.74
VEGFA-207ENST00000413642 TRIM63Q969Q1 353 aa19.69■□□□□ 0.74
VEGFA-207ENST00000413642 TXN2Q99757 166 aa19.69■□□□□ 0.74
VEGFA-207ENST00000413642 SPATA25Q9BR10 227 aa19.69■□□□□ 0.74
VEGFA-207ENST00000413642 CACNG5Q9UF02 275 aa19.69■□□□□ 0.74
VEGFA-207ENST00000413642 TRAV25A0A0B4J276 109 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 YIF1AO95070 293 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 FCGR2BP31994 310 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-207ENST00000413642 TMEM187Q14656 261 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 ZNF79Q15937 498 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 MLANAQ16655 118 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 PVRIGQ6DKI7 326 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 FAM219AQ8IW50 185 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.68■□□□□ 0.74
VEGFA-207ENST00000413642 GAR1Q9NY12 217 aaKnown RBP19.68■□□□□ 0.74
VEGFA-207ENST00000413642 MRPL36Q9P0J6 103 aaKnown RBP19.68■□□□□ 0.74
VEGFA-207ENST00000413642 TMEM56-RWDD3S4R434 201 aa19.68■□□□□ 0.74
VEGFA-207ENST00000413642 IGHV3-49A0A0A0MS15 119 aa19.67■□□□□ 0.74
VEGFA-207ENST00000413642 K7EMT4 169 aa19.67■□□□□ 0.74
VEGFA-207ENST00000413642 GNG7O60262 68 aa19.67■□□□□ 0.74
VEGFA-207ENST00000413642 AKR1C4P17516 323 aa19.67■□□□□ 0.74
VEGFA-207ENST00000413642 ENY2Q9NPA8 101 aa19.67■□□□□ 0.74
VEGFA-207ENST00000413642 NXPH3O95157 252 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 SPCS3P61009 180 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 RELQ04864 619 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-207ENST00000413642 AARDQ4LEZ3 155 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 MUC7Q8TAX7 377 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 CITED4Q96RK1 184 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 FNDC4Q9H6D8 234 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-207ENST00000413642 SMPXQ9UHP9 88 aa19.66■□□□□ 0.74
VEGFA-207ENST00000413642 C15orf62A8K5M9 175 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 SUPT4H1P63272 117 aaKnown RBP19.65■□□□□ 0.74
VEGFA-207ENST00000413642 CCDC190Q86UF4 302 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 DUSP18Q8NEJ0 188 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 GALNT14Q96FL9 552 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 FAM110AQ9BQ89 295 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 HIPK2Q9H2X6 1198 aa19.65■□□□□ 0.74
VEGFA-207ENST00000413642 IGHV3OR16-13A0A075B7E8 117 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 IGHV3-74A0A0B4J1X5 117 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 S100A5P33763 92 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 SUB1P53999 127 aaKnown RBP eCLIP19.64■□□□□ 0.73
VEGFA-207ENST00000413642 BSXQ3C1V8 233 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 OR52E5Q8NH55 327 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 SCGB3A2Q96PL1 93 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 EDA2RQ9HAV5 297 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 UBQLN2Q9UHD9 624 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 KCNIP3Q9Y2W7 256 aa19.64■□□□□ 0.73
VEGFA-207ENST00000413642 KMT2CQ8NEZ4 4911 aaKnown RBP19.64■□□□□ 0.73
VEGFA-207ENST00000413642 IGHV7-4-1A0A0J9YVY3 117 aa19.63■□□□□ 0.73
VEGFA-207ENST00000413642 C3orf84H3BNL1 204 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms