RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 TMEM136Q6ZRR5 245 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 CDC42EP3Q9UKI2 254 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 A0A1W2PN81 502 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 USF1P22415 310 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-208ENST00000410011 BRS3P32247 399 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
LIMS2-208ENST00000410011 RASL11AQ6T310 242 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 Q6ZS92 163 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 C8orf31Q8N9H6 132 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 OR9G1Q8NH87 305 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 COMMD5Q9GZQ3 224 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
LIMS2-208ENST00000410011 H0YJW9 148 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 HLA-DQA1P01909 254 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 REG1AP05451 166 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 GPX1P07203 203 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 COL8A2P25067 703 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 RPL8P62917 257 aaKnown RBP13.55□□□□□ -0.24
LIMS2-208ENST00000410011 DOLPP1Q86YN1 238 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 VSTM2AQ8TAG5 236 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 CBLN4Q9NTU7 201 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 TCAPO15273 167 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 TNFRSF1AP19438 455 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-208ENST00000410011 IBA57Q5T440 356 aaKnown RBP13.55□□□□□ -0.24
LIMS2-208ENST00000410011 FAM231DQ6ZW35 169 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 TMEM167AQ8TBQ9 72 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 ZNF596Q8TC21 504 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 MIEN1Q9BRT3 115 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 SLC25A2Q9BXI2 301 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 RNASE7Q9H1E1 156 aaKnown RBP13.55□□□□□ -0.24
LIMS2-208ENST00000410011 GNB4Q9HAV0 340 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 NAT8BQ9UHF3 227 aa13.55□□□□□ -0.24
LIMS2-208ENST00000410011 FRMD6-AS1P0C7T7 363 aa13.54□□□□□ -0.24
LIMS2-208ENST00000410011 TMEM183BQ1AE95 376 aa13.54□□□□□ -0.24
LIMS2-208ENST00000410011 TOMM20LQ6UXN7 152 aa13.54□□□□□ -0.24
LIMS2-208ENST00000410011 HARBI1Q96MB7 349 aa13.54□□□□□ -0.24
LIMS2-208ENST00000410011 CADP27708 2225 aa13.54□□□□□ -0.24
LIMS2-208ENST00000410011 SPAARA0A1B0GVQ0 90 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 AMY1AP04745 511 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 MLANAQ16655 118 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 RPRMLQ8N4K4 120 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 LINC00311Q8N616 119 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 SIGLECL1Q8N7X8 197 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 OR1L4Q8NGR5 311 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 WIPF2Q8TF74 440 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-208ENST00000410011 FLYWCH2Q96CP2 140 aaKnown RBP13.53□□□□□ -0.24
LIMS2-208ENST00000410011 SAMD10Q9BYL1 202 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 PDPNQ86YL7 162 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 OR4C13Q8NGP0 309 aa13.53□□□□□ -0.24
LIMS2-208ENST00000410011 MRPL20Q9BYC9 149 aaKnown RBP13.53□□□□□ -0.24
LIMS2-208ENST00000410011 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.24
LIMS2-208ENST00000410011 CRYABP02511 175 aaKnown RBP13.52□□□□□ -0.24
LIMS2-208ENST00000410011 TDGF1P3P51864 188 aa13.52□□□□□ -0.24
LIMS2-208ENST00000410011 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.24
LIMS2-208ENST00000410011 TNCP24821 2201 aa13.52□□□□□ -0.24
LIMS2-208ENST00000410011 RAI1Q7Z5J4 1906 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-208ENST00000410011 COMPP49747 757 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-208ENST00000410011 SUB1P53999 127 aaKnown RBP eCLIP13.52□□□□□ -0.25
LIMS2-208ENST00000410011 FAM27E3Q08E93 113 aa13.52□□□□□ -0.25
LIMS2-208ENST00000410011 THAP8Q8NA92 274 aa13.52□□□□□ -0.25
LIMS2-208ENST00000410011 TMEM186Q96B77 213 aa13.52□□□□□ -0.25
LIMS2-208ENST00000410011 F2Z2F3 143 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 RND1Q92730 232 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF586Q9NXT0 402 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 UBE2L3P68036 154 aaKnown RBP13.51□□□□□ -0.25
LIMS2-208ENST00000410011 TMEM108Q6UXF1 575 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 OR2T6Q8NHC8 308 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
LIMS2-208ENST00000410011 MBD6Q96DN6 1003 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF430Q9H8G1 570 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-208ENST00000410011 ZNRD1Q9P1U0 126 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 DYSFO75923 2080 aa13.51□□□□□ -0.25
LIMS2-208ENST00000410011 TCRBV4S1A1TA0A5B7 111 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 C17orf100A8MU93 164 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 CD33P20138 364 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 CDKN1AP38936 164 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 ZNF137PP52743 207 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 TMEM200BQ69YZ2 307 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 FAM57AQ8TBR7 257 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 CHRDL1Q9BU40 450 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 VAMP8Q9BV40 100 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-208ENST00000410011 BMPR1BO00238 502 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 TNFRSF13BO14836 293 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-208ENST00000410011 CHRNB4P30926 498 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 BPIFB3P59826 476 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 FXYD3Q14802 87 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 TDRG1Q3Y452 100 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 OR4B1Q8NGF8 309 aa13.5□□□□□ -0.25
LIMS2-208ENST00000410011 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms