RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 H7BYZ3 331 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 HSD17B6O14756 317 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 RENP00797 406 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 CRYAAP02489 173 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 HSPB1P04792 205 aaKnown RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 MMP7P09237 267 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 SEC11BP0C7V7 166 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 SSTR5P35346 364 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 GPR6P46095 362 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 FABP6P51161 128 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF133P52736 654 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 XGP55808 180 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TAS2R43P59537 309 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 ERVK11-1P61568 191 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 PAFAH1B2P68402 229 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 SRPXP78539 464 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 DHRS2Q13268 280 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 DEFB113Q30KQ7 82 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 PDZD11Q5EBL8 140 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TMEM69Q5SWH9 247 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 OR2G6Q5TZ20 316 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF322Q6U7Q0 402 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 FOXL2NBQ6ZUU3 175 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TPRX1Q8N7U7 411 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 MAPKAPK5-AS1Q8N8E1 139 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 OR2T33Q8NG76 320 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 OR51A2Q8NGJ7 313 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 ZNRF4Q8WWF5 429 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 PTX4Q96A99 478 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 RPEQ96AT9 228 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 MRAP2Q96G30 205 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 CIB3Q96Q77 187 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 OR5B12Q96R08 314 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 OR2H1Q9GZK4 316 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 SPANXA1Q9NS26 97 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TMEM106BQ9NUM4 274 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF230Q9UIE0 474 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-202ENST00000409915 JPT1Q9UK76 154 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
SF3B1-202ENST00000409915 PRRC2AP48634 2157 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 A0A087WZ39 114 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGHV2-26A0A0B4J1V2 119 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 A0A1B0GU03 582 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGLC7A0M8Q6 106 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 C5orf49A4QMS7 147 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 OR6C6A6NF89 314 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 RIIAD1A6NNX1 92 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 H3BQ15 152 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CLDN34H7C241 214 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 RER1O15258 196 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 RBMXL2O75526 392 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 LY6HO94772 140 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 MT-CO2P00403 227 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGHV4-39P01824 125 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 REG1AP05451 166 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 PFN1P07737 140 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 OR8U9P0C7N5 309 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGLC1P0CG04 106 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 AKAIN1P0CW23 69 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGLC2P0DOY2 106 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IGLC3P0DOY3 106 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 GNB3P16520 340 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CELP19835 753 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 GUCA1AP43080 201 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SLC25A1P53007 311 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SLURP1P55000 103 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CKS1BP61024 79 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 PSG4Q00888 419 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 RUNX1Q01196 453 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 COL10A1Q03692 680 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 PLP2Q04941 152 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 BAXQ07812 192 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF154Q13106 437 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 IL15RAQ13261 267 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 MMDQ15546 238 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 TBC1D28Q2M2D7 210 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 COX19Q49B96 90 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 FAM27BQ5VT28 67 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 C11orf71Q6IPW1 123 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 UFSP1Q6NVU6 142 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 TOMM20LQ6UXN7 152 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 WDR82Q6UXN9 313 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SSX8Q7RTT4 187 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SLC25A42Q86VD7 318 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 LRP11Q86VZ4 500 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 ZNF101Q8IZC7 436 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 FBXL14Q8N1E6 418 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 ZCCHC24Q8N2G6 241 aaKnown RBP3.69□□□□□ -1.82
SF3B1-202ENST00000409915 MUC15Q8N387 334 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 KIR3DL3Q8N743 410 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 GVQW1Q8N7I0 195 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 FER1L6-AS1Q8NA97 138 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 SYT8Q8NBV8 401 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 CHST4Q8NCG5 386 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 OR5A2Q8NGI9 324 aa3.69□□□□□ -1.82
SF3B1-202ENST00000409915 OR4C16Q8NGL9 310 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms