RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
GCFC2-202ENST00000409857 ANKRD39Q53RE8 183 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 FAM216BQ8N7L0 139 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 ZBTB34Q8NCN2 500 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 DCTN5Q9BTE1 182 aa13.71□□□□□ -0.21
GCFC2-202ENST00000409857 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.21
GCFC2-202ENST00000409857 MAP1AP78559 2803 aaPredicted RBP13.71□□□□□ -0.22
GCFC2-202ENST00000409857 NDUFB3O43676 98 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 HNF1AP20823 631 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 RPL15P61313 204 aaKnown RBP13.7□□□□□ -0.22
GCFC2-202ENST00000409857 PAX5Q02548 391 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 LRRC10Q5BKY1 277 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 KCNIP4Q6PIL6 250 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 TCF23Q7RTU1 214 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 PSG11Q9UQ72 335 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 RBFOX2O43251 390 aaKnown RBP eCLIP13.7□□□□□ -0.22
GCFC2-202ENST00000409857 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 TEX38Q6PEX7 206 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
GCFC2-202ENST00000409857 TRAPPC1Q9Y5R8 145 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 ABCA2Q9BZC7 2435 aa13.7□□□□□ -0.22
GCFC2-202ENST00000409857 C17orf112F2Z3M2 114 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 TMEM249Q2WGJ8 235 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
GCFC2-202ENST00000409857 OR13A1Q8NGR1 328 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 PPP1R35Q8TAP8 253 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
GCFC2-202ENST00000409857 ATG101Q9BSB4 218 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 TRBV20OR9-2A0A075B6H5 130 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 SOX15O60248 233 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 FOXH1O75593 365 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 CD1BP29016 333 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 DUX4L9Q6RFH8 374 aaPredicted RBP13.69□□□□□ -0.22
GCFC2-202ENST00000409857 ZNRF1Q8ND25 227 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 SLC25A10Q9UBX3 287 aaPredicted RBP13.69□□□□□ -0.22
GCFC2-202ENST00000409857 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
GCFC2-202ENST00000409857 FCN3O75636 299 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 SCGB1D1O95968 90 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 SLC35E4Q6ICL7 350 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 WDR83OSQ9Y284 106 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 B4DSR2 109 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 CD33P20138 364 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 TMEM144Q7Z5S9 345 aa13.68□□□□□ -0.22
GCFC2-202ENST00000409857 FLNAP21333 2647 aaKnown RBP13.68□□□□□ -0.22
GCFC2-202ENST00000409857 IGHV3-7P01780 117 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 LINC01356Q8N9X3 169 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 R3HDM4Q96D70 268 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 DSCAML1Q8TD84 2053 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 PPIAL4CA0A0B4J2A2 164 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 PDE6DO43924 150 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 LCN2P80188 198 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 MAPK1IP1LQ8NDC0 245 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 CBY1Q9Y3M2 126 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 PXMP4Q9Y6I8 212 aa13.67□□□□□ -0.22
GCFC2-202ENST00000409857 RRHO14718 337 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 MGST3O14880 152 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 PROP1O75360 226 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 ARL14EPLP0DKL9 152 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 THBS3P49746 956 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 NUTF2P61970 127 aaKnown RBP13.66□□□□□ -0.22
GCFC2-202ENST00000409857 FKBP11Q9NYL4 201 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
GCFC2-202ENST00000409857 SCO2A0A1W2PP80 73 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 GRIFINA4D1Z8 144 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 FCGR3BO75015 233 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 MSMBP08118 114 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 ZFP36P26651 326 aaKnown RBP13.66□□□□□ -0.22
GCFC2-202ENST00000409857 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 C8orf46Q8TAG6 207 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 MALRD1Q5VYJ5 2156 aa13.66□□□□□ -0.22
GCFC2-202ENST00000409857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■■ 81.3
GCFC2-202ENST00000409857 ADMP35318 185 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 EDDM3AQ14507 147 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 MIC13Q5XKP0 118 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 SNHG12Q9BXW3 62 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 NCOR1P1Q9H4R4 102 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 SMAD7O15105 426 aaKnown RBP13.65□□□□□ -0.22
GCFC2-202ENST00000409857 CD99P14209 185 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 PCP4P48539 62 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 PAX2Q02962 417 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 TREML4Q6UXN2 200 aa13.65□□□□□ -0.22
GCFC2-202ENST00000409857 LOC105371242A0A075B767 164 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 MGST2Q99735 147 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 F6UZH7 168 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 ABHD12Q8N2K0 398 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 LY6G5BQ8NDX9 201 aa13.64□□□□□ -0.23
GCFC2-202ENST00000409857 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms