RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC25A6P12236 298 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 ARL3P36405 182 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 SUB1P53999 127 aaKnown RBP eCLIP15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 SCARB1Q8WTV0 552 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 MISP3Q96FF7 219 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 ELOVL1Q9BW60 279 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 NUDT15Q9NV35 164 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 C21orf62Q9NYP8 219 aa15.19■□□□□ 0.02
PDLIM2-207ENST00000409417 CEBPZOSA8MTT3 80 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 KRTAP10-11P60412 298 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 IFITM3Q01628 133 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 TNFRSF9Q07011 255 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 BSXQ3C1V8 233 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 PVRIGQ6DKI7 326 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 OR9G4Q8NGQ1 327 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 COQ8AQ8NI60 647 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 HSPB7Q9UBY9 170 aa15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 ZMAT5Q9UDW3 170 aaKnown RBP15.18■□□□□ 0.02
PDLIM2-207ENST00000409417 IGHV3-21A0A0B4J1V1 117 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 I3L2K1 104 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 PITX3O75364 302 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 SAP30O75446 220 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 OR2C1O95371 312 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 GPR183P32249 361 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 REC114Q7Z4M0 266 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 OR1S1Q8NH92 325 aa15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 HEYLQ9NQ87 328 aaPredicted RBP15.17■□□□□ 0.02
PDLIM2-207ENST00000409417 TRAV6A0A075B6T7 132 aa15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 PRB2P02812 416 aaPredicted RBP15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 HOXB5P09067 269 aa15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 HTR2BP41595 481 aa15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 GPHB5Q86YW7 130 aa15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 OR4C12Q96R67 309 aa15.16■□□□□ 0.02
PDLIM2-207ENST00000409417 NXPH3O95157 252 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 MT-CO2P00403 227 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 FCGR2BP31994 310 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 GGNBP1Q5YKI7 109 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 PLET1Q6UQ28 207 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 IL34Q6ZMJ4 242 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 BSCL2Q96G97 398 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 HIPK2Q9H2X6 1198 aa15.15■□□□□ 0.02
PDLIM2-207ENST00000409417 OR2T8A6NH00 312 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 F8W735 103 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 CORTO00230 105 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 TGOLN2O43493 480 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 H2AFB2P0C5Z0 115 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 FAM106AQ4KMX7 169 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 SPSB3Q6PJ21 355 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 MITD1Q8WV92 249 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 PINX1Q96BK5 328 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 TXN2Q99757 166 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 GAR1Q9NY12 217 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 PEMTQ9UBM1 199 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 LGALS9O00182 355 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 DTD1Q8TEA8 209 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 RBKSQ9H477 322 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 ZC4H2Q9NQZ6 224 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 AURKAIP1Q9NWT8 199 aaPredicted RBP15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 SIGLEC8Q9NYZ4 499 aa15.14■□□□□ 0.01
PDLIM2-207ENST00000409417 SORL1Q92673 2214 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 FAM90A26D6RGX4 464 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 ADAP1O75689 374 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 IFNA21P01568 189 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 MFAP4P55083 255 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 C2orf83Q53S99 150 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 Q56UQ5 140 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 UBAC2Q8NBM4 344 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 SLC24A4Q8NFF2 622 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 OR52B4Q8NGK2 314 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 ENKURQ8TC29 256 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 U3KQ87 197 aa15.13■□□□□ 0.01
PDLIM2-207ENST00000409417 IGHV3-48P01763 117 aa15.12■□□□□ 0.01
PDLIM2-207ENST00000409417 CSN3P07498 182 aa15.12■□□□□ 0.01
PDLIM2-207ENST00000409417 CHRDL1Q9BU40 450 aa15.12■□□□□ 0.01
PDLIM2-207ENST00000409417 DNAH3Q8TD57 4116 aa15.12■□□□□ 0.01
PDLIM2-207ENST00000409417 CTSGP08311 255 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 ADMP35318 185 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 DEFA1P59665 94 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 DEFA3P59666 94 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 NOXA1Q86UR1 476 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 DUSP18Q8NEJ0 188 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 RNASEH2CQ8TDP1 164 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 ZNF431Q8TF32 576 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 TMEM170AQ8WVE7 144 aa15.11■□□□□ 0.01
PDLIM2-207ENST00000409417 ZNF320A2RRD8 509 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 NUPL2O15504 423 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 MED6O75586 246 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 IGLV1-51P01701 117 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 NPY1RP25929 384 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 OPRK1P41145 380 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 NPBWR1P48145 328 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 ATP5IP56385 69 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 C11orf87Q6NUJ2 197 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 NRARPQ7Z6K4 114 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 SEC22CQ9BRL7 303 aa15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 ZNF436Q9C0F3 470 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 FNDC4Q9H6D8 234 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-207ENST00000409417 IGHV3-35A0A0C4DH35 117 aa15.09■□□□□ 0.01
PDLIM2-207ENST00000409417 MPTX1A8MV57 137 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms