RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PAX6P26367 422 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 OR10J1P30954 320 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 AWAT1Q58HT5 328 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 OR2T6Q8NHC8 308 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 ACY3Q96HD9 319 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 PUS1Q9Y606 427 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP39-202ENST00000409025 IGKV1OR2-108A0A075B7D4 117 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 FCN1O00602 326 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 LINC00869P0C866 280 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 COX6B1P14854 86 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 AREGP15514 252 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 RHOBP62745 196 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 ETFRF1Q6IPR1 90 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 CBLN2Q8IUK8 224 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 DYNAPQ8N1N2 210 aa15.15■□□□□ 0.02
USP39-202ENST00000409025 SRSF12Q8WXF0 261 aaKnown RBP15.15■□□□□ 0.02
USP39-202ENST00000409025 TEX22C9J3V5 150 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 NDUFA3O95167 84 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 CD24P25063 80 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 MEF2BQ02080 365 aaPredicted RBP15.14■□□□□ 0.01
USP39-202ENST00000409025 PVRIGQ6DKI7 326 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 C20orf24Q9BUV8 137 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 FNDC4Q9H6D8 234 aaPredicted RBP15.14■□□□□ 0.01
USP39-202ENST00000409025 RPS10P5Q9NQ39 176 aa15.14■□□□□ 0.01
USP39-202ENST00000409025 VWC2LB2RUY7 222 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 CNIH1O95406 144 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 STAG3L2P0CL84 134 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 STAG3L3P0CL85 134 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 OR1P1Q8NH06 330 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 MALSU1Q96EH3 234 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 SRSF8Q9BRL6 282 aaKnown RBP15.13■□□□□ 0.01
USP39-202ENST00000409025 LPAR2Q9HBW0 351 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 IGHV4-61A0A0C4DH41 118 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 C7orf77A4D0Y5 90 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 H3BQ15 152 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 CXorf1O96002 111 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 APELAP0DMC3 54 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 SSBP2P81877 361 aaPredicted RBP15.13■□□□□ 0.01
USP39-202ENST00000409025 SRSF1Q07955 248 aaKnown RBP eCLIP15.13■□□□□ 0.013e-6■■■■■ 29.6
USP39-202ENST00000409025 RHEBQ15382 184 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 ABHD5Q8WTS1 349 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 C17orf50Q8WW18 174 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 MISP3Q96FF7 219 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 NIPSNAP3BQ9BS92 247 aa15.13■□□□□ 0.01
USP39-202ENST00000409025 CORTO00230 105 aa15.12■□□□□ 0.01
USP39-202ENST00000409025 FAM90A2PQ658T7 463 aa15.12■□□□□ 0.01
USP39-202ENST00000409025 GATAD1Q8WUU5 269 aa15.12■□□□□ 0.01
USP39-202ENST00000409025 PLXNB1O43157 2135 aa15.12■□□□□ 0.01
USP39-202ENST00000409025 AKAP6Q13023 2319 aa15.12■□□□□ 0.01
USP39-202ENST00000409025 PAGE4O60829 102 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 NDUFS6O75380 124 aaKnown RBP15.11■□□□□ 0.01
USP39-202ENST00000409025 ARL14EPLP0DKL9 152 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 CD81P60033 236 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 EBI3Q14213 229 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 C5orf64Q2M2E5 130 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 NANPQ8TBE9 248 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 NPIPB3Q92617 1050 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 SEPSECSQ9HD40 501 aaKnown RBP15.11■□□□□ 0.01
USP39-202ENST00000409025 SMCO4Q9NRQ5 59 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 F11RQ9Y624 299 aaKnown RBP15.11■□□□□ 0.01
USP39-202ENST00000409025 MT-CO2P00403 227 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 MFAP2P55001 183 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 TVP23CQ96ET8 276 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 PERPQ96FX8 193 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 C19orf24Q9BVV8 132 aa15.11■□□□□ 0.01
USP39-202ENST00000409025 ZFYVE26Q68DK2 2539 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 GATA2P23769 480 aaPredicted RBP15.1■□□□□ 0.01
USP39-202ENST00000409025 AKR1C3P42330 323 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 SPNS3Q6ZMD2 512 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 Q8N6K4 173 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 THAP8Q8NA92 274 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 C22orf15Q8WYQ4 148 aa15.1■□□□□ 0.01
USP39-202ENST00000409025 TMEM250H0YL14 139 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 IGHV3-48P01763 117 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 CRYGCP07315 174 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 TMEM11P17152 192 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 SAA4P35542 130 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 RND2P52198 227 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 PAX8Q06710 450 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 FXYD3Q14802 87 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 FAM78BQ5VT40 261 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 SPATA31B1PQ5VZV4 182 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 OR4F5Q8NH21 305 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 OR4F4Q96R69 305 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 IGHV4-30-2A0A087WSY4 118 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 TCRBV4S1A1TA0A5B7 111 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 A1L4Q6 167 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 NCBP2LA6PVI3 153 aaKnown RBP15.09■□□□□ 0.01
USP39-202ENST00000409025 TSPAN9O75954 239 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 FAM106CPP0CH98 169 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 BRS3P32247 399 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 FBLN7Q53RD9 439 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 C19orf35Q6ZS72 473 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 SLC25A33Q9BSK2 321 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 FUT9Q9Y231 359 aa15.09■□□□□ 0.01
USP39-202ENST00000409025 NAV3Q8IVL0 2385 aa15.08■□□□□ 0.01
USP39-202ENST00000409025 NPFFO15130 113 aa15.08■□□□□ 0
USP39-202ENST00000409025 DSCR9P59020 149 aa15.08■□□□□ 0
USP39-202ENST00000409025 AJUBAQ96IF1 538 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms