RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ELOA3CA0A087WX78 387 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C9JCJ5 164 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 CRYGBP07316 175 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 DEFA4P12838 97 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 ATP5G3P48201 142 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 UBE2G2P60604 165 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 PRSS8Q16651 343 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 THAP8Q8NA92 274 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 IGKV1OR2-108A0A075B7D4 117 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 IGHV1-3A0A0C4DH29 117 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 M0R1W7 72 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 SLC25A17O43808 307 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C8orf88P0DMB2 117 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 GRNP28799 593 aaKnown RBP14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 S100A12P80511 92 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 WT1-ASQ06250 92 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 DIAPH2-AS1Q14236 149 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C1orf122Q6ZSJ8 110 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C12orf57Q99622 126 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 DNAJC4Q9NNZ3 241 aa14.29□□□□□ -0.12
HLA-DQB1-204ENST00000399084 A0A1W2PRE2 83 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 GGCTO75223 188 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 TYMSP04818 313 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 FAM3BP58499 235 aaPredicted RBP14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 FOXL1Q12952 345 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C11orf71Q6IPW1 123 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 DTX2Q86UW9 622 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 C22orf15Q8WYQ4 148 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 RPEQ96AT9 228 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 SLC25A33Q9BSK2 321 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 PIEZO2Q9H5I5 2752 aa14.28□□□□□ -0.12
HLA-DQB1-204ENST00000399084 TRAV9-1A0A075B6T8 112 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 CGB1A6NKQ9 187 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 PPP5D1E7EU14 171 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 LY6LH3BQJ8 138 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 CEACAM3P40198 252 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 OR11H6Q8NGC7 330 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 OR2T10Q8NGZ9 312 aa14.27□□□□□ -0.12
HLA-DQB1-204ENST00000399084 TLN1Q9Y490 2541 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TCRBV4S1A1TA0A5B7 111 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TRGC2P03986 189 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 CRYGCP07315 174 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 RPL27AP46776 148 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 BPIFB3P59826 476 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PSG5Q15238 335 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 STXBP6Q8NFX7 210 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SIGLEC9Q9Y336 463 aa14.27□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SPENQ96T58 3664 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TNCP24821 2201 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BKO60814 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BJP06899 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BOP23527 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BBP33778 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BDP58876 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BCP62807 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST2H2BEQ16778 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 MRGPRG-AS1Q2M3A8 158 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 MIR17HGQ75NE6 70 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 MOB3BQ86TA1 216 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OR1P1Q8NH06 330 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BHQ93079 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BNQ99877 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HIST1H2BMQ99879 126 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PRORYQ9H606 182 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 YTHDF2Q9Y5A9 579 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 ROS1P08922 2347 aa14.26□□□□□ -0.13
HLA-DQB1-204ENST00000399084 A0A1W2PPI3 338 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 IGLC7A0M8Q6 106 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 E7EUB6 86 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 LYNX1G3V0Z9 82 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 LYNX1P0DP58 116 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PPP1R27Q86WC6 154 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TMEM190Q8WZ59 177 aa14.25□□□□□ -0.13
HLA-DQB1-204ENST00000399084 MDFIC2A0A1B0GVS7 189 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PSMB11A5LHX3 300 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SPATA31B1PQ5VZV4 182 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 ACY3Q96HD9 319 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SFRP2Q96HF1 295 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TRGV9Q99603 122 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PITPNC1Q9UKF7 332 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 DMXL2Q8TDJ6 3036 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PHOX2AO14813 284 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HTR1DP28221 377 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 NDUFA6P56556 154 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 KIR3DL3Q8N743 410 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TMEM116Q8NCL8 245 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OR1L6Q8NGR2 347 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 DPM3Q9P2X0 92 aa14.24□□□□□ -0.13
HLA-DQB1-204ENST00000399084 CEP295Q9C0D2 2601 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PKDREJQ9NTG1 2253 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SCO2A0A1W2PP80 73 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OOSP1A8MZH6 123 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 COX7A2P2O60397 106 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 FOXH1O75593 365 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 PRTN3P24158 256 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OR2T6Q8NHC8 308 aa14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 NPIPB3Q92617 1050 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms