RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 S1PR3Q99500 378 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 IL19Q9UHD0 177 aa8.13□□□□□ -1.11
PTCHD4-202ENST00000398738 TRIOBPQ9H2D6 2365 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 NUDT3O95989 172 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ESDP10768 282 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 NPY1RP25929 384 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 CA7P43166 264 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF146Q15072 292 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 SAPCD1Q5SSQ6 148 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 WDR73Q6P4I2 378 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ZBTB34Q8NCN2 500 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 NABP2Q9BQ15 211 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 TPSG1Q9NRR2 321 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 AMY1AP04745 511 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 PSG1P11464 419 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 DUTP33316 252 aaKnown RBP8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 CXCL12P48061 93 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF137PP52743 207 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ERVK11-1P61568 191 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ABHD17BQ5VST6 288 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 Q8IYB0 196 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 HCFC1P51610 2035 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 TRGV10A0A0A0MS01 117 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 GGTLC3B5MD39 225 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 TIMM8AO60220 97 aaPredicted RBP8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 TNFSF4P23510 183 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 OR4A47Q6IF82 309 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 LINC00173Q6ZV60 143 aa8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
PTCHD4-202ENST00000398738 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 MPDU1O75352 247 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNRF1Q8ND25 227 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 OR52E5Q8NH55 327 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 TMEM45BQ96B21 275 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 GAL3ST2Q9H3Q3 398 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 MRPS17Q9Y2R5 130 aaKnown RBP8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 GVINP1Q7Z2Y8 2422 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 H3BTX0 84 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 CORTO00230 105 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF138P52744 262 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 SELENOVP59797 346 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 FAM201AQ5SY85 155 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 SPATA12Q7Z6I5 190 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 TMEM251Q8N6I4 163 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 OR9G1Q8NH87 305 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 NEUROG1Q92886 237 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 B4GALT7Q9UBV7 327 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 POLEQ07864 2286 aa8.11□□□□□ -1.11
PTCHD4-202ENST00000398738 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 SMPD2O60906 423 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TOX4O94842 621 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 MT-ND6P03923 174 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 CSN3P07498 182 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 PYYP10082 97 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 VDAC2P45880 294 aaPredicted RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNF134P52741 427 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 MRPL49Q13405 166 aaKnown RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 OR10J3Q5JRS4 329 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 MORN5Q5VZ52 161 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 SLC35E4Q6ICL7 350 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 CNEP1R1Q8N9A8 125 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 KLF14Q8TD94 323 aaPredicted RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TTTY12Q9BZ98 90 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 LINC00470Q9BZP3 86 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 ZNRD1Q9P1U0 126 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 UBE2G1P62253 170 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 DEFB108BQ8NET1 73 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 NAA38Q9BRA0 125 aaKnown RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TXNDC17Q9BRA2 123 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 IGKV3D-15A0A087WSY6 115 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 SS18L1O75177 396 aaPredicted RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 UBE2L3P68036 154 aaKnown RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 EIF4EBP1Q13541 118 aaPredicted RBP8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 GDF5OSQ5U4N7 250 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 LRRC29Q8WV35 223 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 TRIB1Q96RU8 372 aa8.1□□□□□ -1.11
PTCHD4-202ENST00000398738 PLXNB1O43157 2135 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 TRBV9A0A0B4J1U6 114 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 MUC21A0A0G2JKD1 596 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 MUC21A0A140T8X8 626 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 OR4C46A6NHA9 309 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 C9JCJ5 164 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 GNG5P63218 68 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 MUC21Q5SSG8 566 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 SPEM1Q8N4L4 309 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 BLNKQ8WV28 456 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 NRN1LQ496H8 165 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 ACP7Q6ZNF0 438 aa8.09□□□□□ -1.11
PTCHD4-202ENST00000398738 C19orf35Q6ZS72 473 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms