RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 C8orf4Q9NR00 106 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 OR51B2Q9Y5P1 312 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 TRAV1-2A0A0B4J238 106 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 IGHV3-66A0A0C4DH42 116 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 PDCD5O14737 125 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 SPART-AS1P0CW21 52 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 FCGR2CP31995 323 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 RCN1Q15293 331 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 OR13F1Q8NGS4 319 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 TMEM56Q96MV1 263 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 SLC5A7Q9GZV3 580 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 TMEM235A6NFC5 223 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 MARCH11A6NNE9 402 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 PTGES3LE9PB15 166 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 GNG7O60262 68 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 MT-CO2P00403 227 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 PPYP01298 95 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF688P0C7X2 276 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 ERVK-16P61578 105 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 ACTL10Q5JWF8 245 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 DCANP1Q8TF63 244 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 MISP3Q96FF7 219 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 C1QTNF4Q9BXJ3 329 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 RNF167Q9H6Y7 350 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 ACOT13Q9NPJ3 140 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 NSG2Q9Y328 171 aa5.99□□□□□ -1.45
SCFD1-202ENST00000396629 TMEM189A5PLL7 270 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 GNG2P59768 71 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 ARPC4P59998 168 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 MLLT11Q13015 90 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF600Q6ZNG1 722 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF818PQ6ZRF7 136 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 C6orf223Q8N319 242 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF114Q8NC26 417 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 STXBP6Q8NFX7 210 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 OR51H1Q8NH63 302 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 RAB40CQ96S21 281 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 FKBP11Q9NYL4 201 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 PRNDQ9UKY0 176 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 PUS1Q9Y606 427 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCFD1-202ENST00000396629 A0A1W2PS18 150 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 SNAPC5O75971 98 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 IGHV3-48P01763 117 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 HSMCR30P0CW71 290 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 PTHLHP12272 177 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 NPPCP23582 126 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 FGF9P31371 208 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-202ENST00000396629 OXA1LQ15070 435 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 KCTD21Q4G0X4 260 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 AADACL3Q5VUY0 350 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF705AQ6ZN79 300 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-202ENST00000396629 CCDC90BQ9GZT6 254 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 DKK2Q9UBU2 259 aa5.98□□□□□ -1.45
SCFD1-202ENST00000396629 NBDYA0A0U1RRE5 68 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 A0A1B0GU03 582 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 TEX48A0A1B0GUV7 120 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 SMIM9A6NGZ8 99 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 DBX1A6NMT0 343 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF705FA8MVS1 300 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF705DP0CH99 300 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF705BP0CI00 300 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-202ENST00000396629 RAB3BP20337 219 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 F2RP25116 425 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 CRYBB3P26998 211 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 LPAR6P43657 344 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 BEST4Q8NFU0 473 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 NIPSNAP3BQ9BS92 247 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 XCL2Q9UBD3 114 aa5.97□□□□□ -1.45
SCFD1-202ENST00000396629 DMBT1Q9UGM3 2413 aaPredicted RBP5.97□□□□□ -1.45
SCFD1-202ENST00000396629 CASQ2O14958 399 aaPredicted RBP5.96□□□□□ -1.45
SCFD1-202ENST00000396629 SCGNO76038 276 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 TMEM50AO95807 157 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 KRASP01116 189 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 G6PCP35575 357 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 P2RY1P47900 373 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 NPBWR1P48145 328 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 FXYD4P59646 89 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 NUTF2P61970 127 aaKnown RBP5.96□□□□□ -1.45
SCFD1-202ENST00000396629 SPATA12Q7Z6I5 190 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 TPRA1Q86W33 373 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 HOGA1Q86XE5 327 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 MOB3AQ96BX8 217 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 YTHDF1Q9BYJ9 559 aaKnown RBP5.96□□□□□ -1.45
SCFD1-202ENST00000396629 SCN3BQ9NY72 215 aa5.96□□□□□ -1.45
SCFD1-202ENST00000396629 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 H3BMM0 161 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 GNRHRP30968 328 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 TMEM88Q6PEY1 159 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 C15orf53Q8NAA6 179 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 ZNRF2Q8NHG8 242 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 FCAMRQ8WWV6 532 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 PINX1Q96BK5 328 aaKnown RBP5.96□□□□□ -1.46
SCFD1-202ENST00000396629 MGLLQ99685 303 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 TMED3Q9Y3Q3 217 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 RFNGQ9Y644 331 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 U3KQE9 123 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
SCFD1-202ENST00000396629 HELTA6NFD8 242 aa5.95□□□□□ -1.46
SCFD1-202ENST00000396629 PGLYRP1O75594 196 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms