RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TRAV14DV4A0A0A6YYC5 116 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 NUPL2O15504 423 aaKnown RBP4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 IGKV1-39P01597 117 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 IGKV1D-39P04432 117 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 EWSR1Q01844 656 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 RNASEH2CQ8TDP1 164 aaKnown RBP4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 TMEM50AO95807 157 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 GIG44P09565 113 aaPredicted RBP4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR13C7P0DN81 318 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 DMBX1Q8NFW5 382 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR5H2Q8NGV7 314 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR51H1Q8NH63 302 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 RHPN1-AS1Q9BWJ2 59 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 IFT46Q9NQC8 304 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 STAB2Q8WWQ8 2551 aa4.54□□□□□ -1.68
SMARCAD1-203ENST00000394961 SLC25A4P12235 298 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 UCP1P25874 307 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 NPBWR1P48145 328 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 SUB1P53999 127 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 C2orf83Q53S99 150 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR10W1Q8NGF6 305 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 DCANP1Q8TF63 244 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 CNBD2Q96M20 576 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 ZNF2Q9BSG1 426 aaPredicted RBP4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 EHFQ9NZC4 300 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 TNCP24821 2201 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 CTDSPLO15194 276 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 CLN5O75503 358 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 RNASE2P10153 161 aaKnown RBP4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 PRSS3P35030 304 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 MRPS10P82664 201 aaKnown RBP4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 ERHP84090 104 aaKnown RBP4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR6F1Q8NGZ6 308 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 SLC45A2Q9UMX9 530 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 OR2T8A6NH00 312 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 C19orf35Q6ZS72 473 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 TMEM229BQ8NBD8 167 aa4.53□□□□□ -1.68
SMARCAD1-203ENST00000394961 RPS10-NUDT3A0A1W2PQS6 291 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 GSTZ1O43708 216 aaPredicted RBP4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TOMM40O96008 361 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 ALDH3B2P48448 385 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 AP2S1P53680 142 aaPredicted RBP4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 DHODHQ02127 395 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 OR8G2PQ6IF36 304 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 SLC25A24Q6NUK1 477 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TOMM20LQ6UXN7 152 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 NOXA1Q86UR1 476 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 C11orf45Q8TAV5 145 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 GLMPQ8WWB7 406 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 FCAMRQ8WWV6 532 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 RNF2Q99496 336 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 C1QTNF4Q9BXJ3 329 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 MS4A6AQ9H2W1 248 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 X6R8D5 127 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 A0A075B6Q4 140 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF320A2RRD8 509 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 HELTA6NFD8 242 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TNFAIP8O95379 198 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 REG1AP05451 166 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 APELAP0DMC3 54 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 EIF2B2P49770 351 aaKnown RBP4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 RBMS2Q15434 407 aaKnown RBP4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 OR2B11Q5JQS5 317 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TBC1D26Q86UD7 250 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 DEDD2Q8WXF8 326 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 BCL7BQ9BQE9 202 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 MT-CO2P00403 227 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 RLN1P04808 185 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 IFNA4P05014 189 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TMEM187Q14656 261 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 DEFB135Q30KP9 77 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TMEM69Q5SWH9 247 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 C1orf194Q5T5A4 169 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 IDNKQ5T6J7 187 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 TCF24Q7RTU0 167 aa4.52□□□□□ -1.69
SMARCAD1-203ENST00000394961 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 IGHV3-23P01764 117 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 CLEC2LP0C7M8 214 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 SPCS3P61009 180 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 Q56UQ5 140 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ETFRF1Q6IPR1 90 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF705AQ6ZN79 300 aaPredicted RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 H2BFWTQ7Z2G1 175 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 CCDC71LQ8N9Z2 235 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 RARRES2Q99969 163 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 DUXBA0A1W2PPF3 345 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF705FA8MVS1 300 aaPredicted RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 IGKV1-5P01602 117 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 EIF4EP06730 217 aaKnown RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF705DP0CH99 300 aaPredicted RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 G6PCP35575 357 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 HTR2BP41595 481 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 RNF212Q495C1 297 aa4.51□□□□□ -1.69
SMARCAD1-203ENST00000394961 NMSQ5H8A3 153 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms