RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 NBPF19A0A087WUL8 3843 aa4.45□□□□□ -1.7
TRAV35-201ENST00000390462 TSC2P49815 1807 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 THADAQ6YHU6 1953 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 IGHV3-49A0A0A0MS15 119 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 SIGLEC16A6NMB1 481 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 OR7C2O60412 319 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF682O95780 498 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 IGLV3-25P01717 112 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 OR56A5P0C7T3 313 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 PI4KAP42356 2102 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 NOVP48745 357 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 DAPP51397 102 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 GNA12Q03113 381 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 MMDQ15546 238 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 MKXQ8IYA7 352 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF664Q8N3J9 261 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 CD200R1Q8TD46 325 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 PFDN5Q99471 154 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 CHST6Q9GZX3 395 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 TMEM38BQ9NVV0 291 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 TEX15Q9BXT5 2789 aa4.44□□□□□ -1.7
TRAV35-201ENST00000390462 TNRC6BQ9UPQ9 1833 aaKnown RBP4.44□□□□□ -1.7
TRAV35-201ENST00000390462 MYO16Q9Y6X6 1858 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 HCFC1P51610 2035 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 PCNX3Q9H6A9 2034 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 MUC22E2RYF6 1773 aaPredicted RBP4.43□□□□□ -1.7
TRAV35-201ENST00000390462 ARL5CA6NH57 179 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 AIPO00170 330 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 GYPCP04921 128 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF806P0C7X5 589 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 CST6Q15828 149 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 SMIM21Q3B7S5 101 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 KRTAP24-1Q3LI83 254 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 RTN4IP1Q8WWV3 396 aaPredicted RBP4.43□□□□□ -1.7
TRAV35-201ENST00000390462 MAL2Q969L2 176 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 STARD4Q96DR4 205 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 LYSMD1Q96S90 227 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 NMNAT3Q96T66 252 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 NRTNQ99748 197 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 CHCHD7Q9BUK0 85 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 TAAR3PQ9P1P4 343 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 MRPS16Q9Y3D3 137 aaKnown RBP4.43□□□□□ -1.7
TRAV35-201ENST00000390462 NUBP2Q9Y5Y2 271 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
TRAV35-201ENST00000390462 ABCA7Q8IZY2 2146 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 COL6A6A6NMZ7 2263 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 URB1O60287 2271 aaKnown RBP4.42□□□□□ -1.7
TRAV35-201ENST00000390462 DOPEY2Q9Y3R5 2298 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 A0A1W2PQ67 120 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 RFPL4AA6NLU0 287 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 RFPL4AL1F8VTS6 287 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 COX7A2LO14548 114 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 GSTZ1O43708 216 aaPredicted RBP4.42□□□□□ -1.7
TRAV35-201ENST00000390462 ANKRD17O75179 2603 aaKnown RBP4.42□□□□□ -1.7
TRAV35-201ENST00000390462 AKR1C3P42330 323 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 DEFA6Q01524 100 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 LOXL1Q08397 574 aaPredicted RBP4.42□□□□□ -1.7
TRAV35-201ENST00000390462 PDGFRLQ15198 375 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 RHEBQ15382 184 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 GRK1Q15835 563 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 IL17AQ16552 155 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 SLC22A24Q8N4F4 322 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF615Q8N8J6 731 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 OR8J3Q8NGG0 315 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 VOPP1Q96AW1 172 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 GPR82Q96P67 336 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 TRIB3Q96RU7 358 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 CCDC90BQ9GZT6 254 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 GPR84Q9NQS5 396 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 CEP192Q8TEP8 1941 aa4.42□□□□□ -1.7
TRAV35-201ENST00000390462 MYO9AB2RTY4 2548 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 PIKFYVEQ9Y2I7 2098 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 PTPRDP23468 1912 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 NKX2-6A6NCS4 301 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 LST1O00453 97 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 HLA-DQA1P01909 254 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 APOA2P02652 100 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 TFPTP0C1Z6 253 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 S100A7P31151 101 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 LHX2P50458 406 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 CCR6P51684 374 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF140P52738 457 aaPredicted RBP4.41□□□□□ -1.7
TRAV35-201ENST00000390462 DEFA3P59666 94 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 C15orf32Q32M92 178 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 Q6ZS49 121 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 KRTCAP2Q8N6L1 136 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 Q8N7P7 452 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 ZNF675Q8TD23 568 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 GPR119Q8TDV5 335 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 PLEKHB2Q96CS7 222 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 PDXPQ96GD0 296 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 ERMAPQ96PL5 475 aaPredicted RBP4.41□□□□□ -1.7
TRAV35-201ENST00000390462 CCDC32Q9BV29 185 aa4.41□□□□□ -1.7
TRAV35-201ENST00000390462 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms