RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 PARLQ9H300 379 aa5.97□□□□□ -1.45
CCDC171-201ENST00000380701 VCX2Q9H322 139 aa5.97□□□□□ -1.45
CCDC171-201ENST00000380701 NAT1P18440 290 aa5.96□□□□□ -1.45
CCDC171-201ENST00000380701 OR5AN1Q8NGI8 311 aa5.96□□□□□ -1.45
CCDC171-201ENST00000380701 MYO16Q9Y6X6 1858 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 SCGB1A1P11684 91 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 LYPD1Q8N2G4 141 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF414Q96IQ9 312 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 TPRP12270 2363 aaKnown RBP5.96□□□□□ -1.46
CCDC171-201ENST00000380701 SEC16AO15027 2179 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 SAP30O75446 220 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 EIF3GO75821 320 aaKnown RBP eCLIP5.96□□□□□ -1.46
CCDC171-201ENST00000380701 IGF2-ASQ6U949 168 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 TMEM136Q6ZRR5 245 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 BEND2Q8NDZ0 799 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 PLPPR1Q8TBJ4 325 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 Q9H3A6 140 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 IL36BQ9NZH7 164 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 FNDC10F2Z333 226 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 CCL3L1P16619 93 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 DUTP33316 252 aaKnown RBP5.96□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF415Q09FC8 603 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 TMEM86BQ8N661 226 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 RCC1LQ96I51 464 aaKnown RBP5.96□□□□□ -1.46
CCDC171-201ENST00000380701 JKAMPQ9P055 326 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 A0A0G2JMZ2 1700 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 LRRC37A2A6NM11 1700 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 ZNFX1Q9P2E3 1918 aaKnown RBP5.96□□□□□ -1.46
CCDC171-201ENST00000380701 A0A1B0GUS0 222 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 LINC00477Q96M19 166 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 SCGB3A1Q96QR1 104 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 AICDAQ9GZX7 198 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 TRPM7Q96QT4 1865 aa5.96□□□□□ -1.46
CCDC171-201ENST00000380701 TRAV34A0A0B4J273 112 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 M0R381 172 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF250P15622 560 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 SIGLEC15Q6ZMC9 328 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 A0A0G2JNJ9 132 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 MSMBP08118 114 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 IGFBP2P18065 325 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 OR10J3Q5JRS4 329 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 TTC9CQ8N5M4 171 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 OR13C6PQ8NH95 151 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 MARVELD3Q96A59 401 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 RARRES2Q99969 163 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 Q9UFV3 132 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 A0A1B0GWJ7 208 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 CCL20P78556 96 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 C5orf64Q2M2E5 130 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 FOXL2NBQ6ZUU3 175 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 TRGV9Q99603 122 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 POLR2AP24928 1970 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 H0YL77 283 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 INSP01308 110 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3-11P01762 117 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 RPLP1P05386 114 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 CELA3BP08861 270 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 NMBP08949 121 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 RPL36AP83881 106 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 FAM219BQ5XKK7 198 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 LCN12Q6JVE5 192 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 SLC25A48Q6ZT89 311 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 VKORC1L1Q8N0U8 176 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 RPL36ALQ969Q0 106 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 CYSLTR1Q9Y271 337 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 RFNGQ9Y644 331 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 A0A1W2PRX2 142 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 KLK2P20151 261 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 PLA2G2CQ5R387 149 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 HSPB9Q9BQS6 159 aa5.95□□□□□ -1.46
CCDC171-201ENST00000380701 MBNL3Q9NUK0 354 aaKnown RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 GREB1LQ9C091 1923 aaPredicted RBP5.95□□□□□ -1.46
CCDC171-201ENST00000380701 CROCCQ5TZA2 2017 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 A6NNC1 897 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 RNF224P0DH78 156 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 HTN3P15516 51 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 RNASE4P34096 147 aaKnown RBP5.94□□□□□ -1.46
CCDC171-201ENST00000380701 Q6ZS49 121 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 IZUMO1RA6ND01 250 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 CD7P09564 240 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 SRIP30626 198 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 UBE2E1P51965 193 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF525Q8N782 197 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 Q8TCH9 128 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 SMPXQ9UHP9 88 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 A0A087WX48 190 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV1-3A0A0C4DH29 117 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 EREGO14944 169 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 IGKV3-20P01619 116 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 CXCL2P19875 107 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 EFNB3Q15768 340 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 MORN3Q6PF18 240 aaPredicted RBP5.94□□□□□ -1.46
CCDC171-201ENST00000380701 ATP5L2Q7Z4Y8 100 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 OR9G4Q8NGQ1 327 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 RMI2Q96E14 147 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 A0A087WWC5 75 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms