RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 KRTAP10-9P60411 292 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 CD69Q07108 199 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 HABP2Q14520 560 aaPredicted RBP8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 CDSNQ15517 529 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 DTX2Q86UW9 622 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 PNKDQ8N490 385 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 LY6G5BQ8NDX9 201 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 C1orf159Q96HA4 380 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 RNF5Q99942 180 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 KLF2Q9Y5W3 355 aaPredicted RBP8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 ABCA2Q9BZC7 2435 aa8.47□□□□□ -1.05
POLR2J3-201ENST00000379340 LYNX1G3V0Z9 82 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 LYNX1P0DP58 116 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 IGFBP2P18065 325 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 SPNS3Q6ZMD2 512 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 SSMEM1Q8WWF3 244 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 RNF2Q99496 336 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 PARLQ9H300 379 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 PATZ1Q9HBE1 687 aaKnown RBP8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 SLC45A2Q9UMX9 530 aa8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 NIPBLQ6KC79 2804 aaeCLIP8.46□□□□□ -1.06
POLR2J3-201ENST00000379340 BUB1B-PAK6H3BSN5 160 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 M0R1W7 72 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 CLN5O75503 358 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 OPN1MWP04001 364 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 OPN1MW2P0DN77 364 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 OPN1MW3P0DN78 364 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 DIAPH2-AS1Q14236 149 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 ELOBQ15370 118 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 GCSAMLQ5JQS6 135 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 SLC16A13Q7RTY0 426 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 RPUSD4Q96CM3 377 aaKnown RBP8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 SAV1Q9H4B6 383 aaPredicted RBP8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 ZNF430Q9H8G1 570 aaPredicted RBP8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 CHODLQ9H9P2 273 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 FUT9Q9Y231 359 aa8.45□□□□□ -1.06
POLR2J3-201ENST00000379340 IGHV1-3A0A0C4DH29 117 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 HAX1O00165 279 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 EIF3GO75821 320 aaKnown RBP eCLIP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 S100A6P06703 90 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 LINC00869P0C866 280 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ARL14EPLP0DKL9 152 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 HOXB4P17483 251 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 GCHFRP30047 84 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 PAX2Q02962 417 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 GAMTQ14353 236 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 SSX2Q16385 188 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ZNF674Q2M3X9 581 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ETFRF1Q6IPR1 90 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ZNF114Q8NC26 417 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ABHD5Q8WTS1 349 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 GATAD1Q8WUU5 269 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ANAPC16Q96DE5 110 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 DOK5Q9P104 306 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 INSIG2Q9Y5U4 225 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ENSAO43768 121 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 SLC25A17O43808 307 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 CRYGBP07316 175 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 OR10J1P30954 320 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 COMPP49747 757 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 TAS2R45P59539 299 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 RPL23P62829 140 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 ADIRFQ15847 76 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 PRSS8Q16651 343 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 OR10W1Q8NGF6 305 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 OR4P4Q8NGL7 312 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 Q8WTZ3 238 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 RPEQ96AT9 228 aa8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 TECRQ9NZ01 308 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-201ENST00000379340 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 CGB1A6NKQ9 187 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 LY6LH3BQJ8 138 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 CORTO00230 105 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 ACTL6BO94805 426 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 SOD3P08294 240 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 OR5G3P0C626 314 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 DEFA4P12838 97 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 AREGP15514 252 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 CEACAM3P40198 252 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 RPL27AP46776 148 aaKnown RBP8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 SELENOTP62341 195 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 PSG5Q15238 335 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 CST9LP1Q5W188 147 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 C1orf122Q6ZSJ8 110 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 MOB3BQ86TA1 216 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 ZFP82Q8N141 532 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 KIR3DL3Q8N743 410 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 OR11H6Q8NGC7 330 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 C2CD4CQ8TF44 421 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 ITLN2Q8WWU7 325 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 SRSF8Q9BRL6 282 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms