RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 OR1D5P58170 312 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 SNRNP40Q96DI7 357 aaKnown RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 WFDC3Q8IUB2 231 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 BCL6BQ8N143 479 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 FLYWCH2Q96CP2 140 aaKnown RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 SPACA9Q96E40 222 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 TMUB1Q9BVT8 246 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 A0A1B0GW15 77 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 PLAUP00749 431 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 TTC32Q5I0X7 151 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF414Q96IQ9 312 aa9.12□□□□□ -0.95
USP6NL-202ENST00000379237 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
USP6NL-202ENST00000379237 EFNA2O43921 213 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 SP1P08047 785 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 TNFRSF4P43489 277 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 CACNG7P62955 275 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 SRSF7Q16629 238 aaKnown RBP eCLIP9.11□□□□□ -0.95
USP6NL-202ENST00000379237 PCSK4Q6UW60 755 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 PDPNQ86YL7 162 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF479Q96JC4 524 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 C1QTNF5Q9BXJ0 243 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 NCOA6Q14686 2063 aaPredicted RBP9.11□□□□□ -0.95
USP6NL-202ENST00000379237 THSD7AQ9UPZ6 1657 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 F2RL2O00254 374 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 IGFBP7Q16270 282 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 PRSS57Q6UWY2 283 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 C20orf204Q6ZNR8 217 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 MGST2Q99735 147 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 REV3LO60673 3130 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 ABCA7Q8IZY2 2146 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 MED12LQ86YW9 2145 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 C8orf88P0DMB2 117 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 TFF2Q03403 129 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 OR52E5Q8NH55 327 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
USP6NL-202ENST00000379237 LINC00479Q96M42 142 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 CHRNA10Q9GZZ6 450 aa9.11□□□□□ -0.95
USP6NL-202ENST00000379237 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.1□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF716A6NP11 495 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.1□□□□□ -0.95
USP6NL-202ENST00000379237 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SFTA2Q6UW10 78 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 OR9G4Q8NGQ1 327 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 OR2H2O95918 312 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 TMEM92Q6UXU6 159 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SPATA12Q7Z6I5 190 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 TEX29Q8N6K0 151 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 B5MCH6 92 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SYNGR3O43761 229 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 EFEMP2O95967 443 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 RIGQ13278 110 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 C10orf128Q5T292 105 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 ARPC1AQ92747 370 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 ORM2P19652 201 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 LINC00696Q6ZRV3 163 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 ZNF295-AS1Q8N0V1 137 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SPEM1Q8N4L4 309 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 C18orf15Q96N68 181 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 CDX2Q99626 313 aaPredicted RBP9.1□□□□□ -0.95
USP6NL-202ENST00000379237 MBNL3Q9NUK0 354 aaKnown RBP9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SSUH2Q9Y2M2 353 aa9.1□□□□□ -0.95
USP6NL-202ENST00000379237 SPAARA0A1B0GVQ0 90 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 C3AR1Q16581 482 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 RPP25Q9BUL9 199 aaKnown RBP9.09□□□□□ -0.95
USP6NL-202ENST00000379237 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 C2orf70A6NJV1 201 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 CXCL10P02778 98 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 AREGP15514 252 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 NTF4P34130 210 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 TEX45Q8NA69 505 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 TCF19Q9Y242 345 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 C15orf62A8K5M9 175 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 CT45A10P0DMU9 189 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 FAM168AQ92567 244 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 CITED1Q99966 193 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 LINC00470Q9BZP3 86 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 OCIAD1Q9NX40 245 aa9.09□□□□□ -0.95
USP6NL-202ENST00000379237 PGPA6NDG6 321 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 COL9A1P20849 921 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 GDF1P27539 372 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 RPL30P62888 115 aaKnown RBP9.08□□□□□ -0.96
USP6NL-202ENST00000379237 H1FXQ92522 213 aaKnown RBP9.08□□□□□ -0.96
USP6NL-202ENST00000379237 C19orf24Q9BVV8 132 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 TRAV24A0A0B4J272 114 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 SMAD7O15105 426 aaKnown RBP9.08□□□□□ -0.96
USP6NL-202ENST00000379237 ATP5G2Q06055 141 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 SP5Q6BEB4 398 aaPredicted RBP9.08□□□□□ -0.96
USP6NL-202ENST00000379237 SPTY2D1-AS1A0A0U1RR47 76 aa9.08□□□□□ -0.96
USP6NL-202ENST00000379237 GABRG2P18507 467 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms