RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 DPF1Q92782 380 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 P2RX4Q99571 388 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 HSBP1O75506 76 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 ATP5IP56385 69 aaPredicted RBP11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 TPPP2P59282 170 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 STPG3Q8N7X2 389 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
SHROOM1-203ENST00000378679 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 TCTAP57738 103 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 TFF3Q07654 80 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 LIME1Q9H400 295 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 FGF16O43320 207 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 LYPD2Q6UXB3 125 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 UPK2O00526 184 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 CRISP2P16562 243 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BNQ99877 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 HIST1H2BMQ99879 126 aa11.72□□□□□ -0.53
SHROOM1-203ENST00000378679 C20orf202A1L168 122 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 B4DEV8 164 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 UBE2CO00762 179 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 CXCL1P09341 107 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 ARL14EPLP0DKL9 152 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 COL8A2P25067 703 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 MOSP00540 346 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 C8orf88P0DMB2 117 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 HOXA5P20719 270 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 ZNF124Q15973 351 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 MRPL54Q6P161 138 aaKnown RBP11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 ATOH7Q8N100 152 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 OR1P1Q8NH06 330 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 SGMS2Q8NHU3 365 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 IFI27L2Q9H2X8 130 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
SHROOM1-203ENST00000378679 LINC00473A8K010 186 aa11.71□□□□□ -0.54
SHROOM1-203ENST00000378679 LMO1P25800 156 aa11.71□□□□□ -0.54
SHROOM1-203ENST00000378679 ERASQ7Z444 233 aa11.71□□□□□ -0.54
SHROOM1-203ENST00000378679 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 CAMPP49913 170 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 MFAP4P55083 255 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 HSPB7Q9UBY9 170 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 IGFBP2P18065 325 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 IER3P46695 156 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 TMEM183BQ1AE95 376 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 OR5R1Q8NH85 324 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 S4R3C0 116 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 CD33P20138 364 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 GATAD1Q8WUU5 269 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 EAF1Q96JC9 268 aaPredicted RBP11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 WDFY4Q6ZS81 3184 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 RRHO14718 337 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 C11orf42Q8N5U0 333 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 ANAPC10Q9UM13 185 aa11.7□□□□□ -0.54
SHROOM1-203ENST00000378679 EML6Q6ZMW3 1958 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 H3BTX0 84 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 SOD3P08294 240 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 FCGR2BP31994 310 aaPredicted RBP11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 BMI1P35226 326 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 EFNA4P52798 201 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 C10orf55Q5SWW7 151 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 Q6ZRM9 215 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 PPP1R27Q86WC6 154 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 CYYR1Q96J86 154 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 MED12LQ86YW9 2145 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 IGLV3-9A0A075B6K5 115 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 PGPA6NDG6 321 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 TIMM23O14925 209 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 ZNF253O75346 499 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 TGFAP01135 160 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 COL8A1P27658 744 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 CDPF1Q6NVV7 123 aa11.69□□□□□ -0.54
SHROOM1-203ENST00000378679 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms