RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RCHY1Q96PM5 261 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 VAX1Q5SQQ9 334 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 SDHCQ99643 169 aaPredicted RBP13.69□□□□□ -0.22
RGP1-201ENST00000378078 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 Q96M66 194 aa13.69□□□□□ -0.22
RGP1-201ENST00000378078 DTX2Q86UW9 622 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 COQ2Q96H96 371 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 SLC25A2Q9BXI2 301 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 JPT2Q9H910 190 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 IGKV1D-43A0A0B4J1Z2 117 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 C12orf77C9JDV5 145 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 RAMP3O60896 148 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 PRB1P04280 392 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 FMC1Q96HJ9 113 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 IMMP1LQ96LU5 166 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 RPP21Q9H633 154 aaKnown RBP13.68□□□□□ -0.22
RGP1-201ENST00000378078 PYYP10082 97 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 CEACAM1P13688 526 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 PAX1P15863 534 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 OR2K2Q8NGT1 345 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 MPTX1A8MV57 137 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 NBR2O15453 112 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 HLA-DQB1P01920 261 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 SMIM6P0DI80 62 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 RP1P56715 2156 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 SIGLEC15Q6ZMC9 328 aa13.68□□□□□ -0.22
RGP1-201ENST00000378078 HIGD1CA8MV81 97 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 MT-ND6P03923 174 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 DEFB130BP0DP73 79 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 DEFB130AP0DP74 79 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 PRADC1Q9BSG0 188 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 MLNRO43193 412 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 RNF182Q8N6D2 247 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 SPCS1Q9Y6A9 102 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 GLRXP35754 106 aa13.67□□□□□ -0.22
RGP1-201ENST00000378078 LY6HO94772 140 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 CHTOPQ9Y3Y2 248 aaKnown RBP13.66□□□□□ -0.22
RGP1-201ENST00000378078 ARID1AO14497 2285 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 PAX4O43316 350 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 GATAD1Q8WUU5 269 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 ICE1Q9Y2F5 2266 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 PSG7Q13046 419 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 GTF3AQ92664 365 aaKnown RBP13.66□□□□□ -0.22
RGP1-201ENST00000378078 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
RGP1-201ENST00000378078 KBTBD11-OT1A0A1B0GTJ5 212 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 C17orf100A8MU93 164 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 ZNF600Q6ZNG1 722 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 SPRR3Q9UBC9 169 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 CD300EQ496F6 205 aaPredicted RBP13.66□□□□□ -0.22
RGP1-201ENST00000378078 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 SMIM8Q96KF7 97 aa13.66□□□□□ -0.22
RGP1-201ENST00000378078 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 HOXA3O43365 443 aaPredicted RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 TMEM8BA6NDV4 472 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 TIMM23O14925 209 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 LIMS1P48059 325 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 TMEM249Q2WGJ8 235 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 SRSF6Q13247 344 aaKnown RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 WDYHV1Q96HA8 205 aa13.65□□□□□ -0.22
RGP1-201ENST00000378078 ALX4Q9H161 411 aaPredicted RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
RGP1-201ENST00000378078 ZNF345Q14585 488 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 A0A1B0GUT8 65 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 PAX8Q06710 450 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 PUSL1Q8N0Z8 303 aaKnown RBP13.64□□□□□ -0.23
RGP1-201ENST00000378078 THADAQ6YHU6 1953 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 A0A096LPF7 62 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 NPIPB13A6NJU9 1138 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 NPIPB5A8MRT5 1133 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 FCN3O75636 299 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 WNT2P09544 360 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 FOXD3Q9UJU5 478 aaPredicted RBP13.64□□□□□ -0.23
RGP1-201ENST00000378078 MYOD1P15172 320 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 FOXF2Q12947 444 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 Q5BKY6 102 aa13.64□□□□□ -0.23
RGP1-201ENST00000378078 CHCHD2Q9Y6H1 151 aaPredicted RBP13.64□□□□□ -0.23
RGP1-201ENST00000378078 ZNF318Q5VUA4 2279 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 A0A0G2JK05 382 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 STPG2Q8N412 459 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 H3BUT2 72 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 TOMM40O96008 361 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 FSTP19883 344 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
RGP1-201ENST00000378078 FOXL1Q12952 345 aa13.63□□□□□ -0.23
RGP1-201ENST00000378078 ZNF660Q6AZW8 331 aaPredicted RBP13.63□□□□□ -0.23
RGP1-201ENST00000378078 ESPL1Q14674 2120 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 PLXNA1Q9UIW2 1896 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 NCR2O95944 276 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 H2BFSP57053 126 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 DERL1Q9BUN8 251 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 IGHV3-16A0A0C4DH30 117 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 FAM166AQ6J272 317 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms