RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 ZNF785A8K8V0 405 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 F8W735 103 aaPredicted RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 CDS2O95674 445 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 S100A5P33763 92 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 FAUP35544 74 aaKnown RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 SNCAP37840 140 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 RELQ04864 619 aaPredicted RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 SPINK9Q5DT21 86 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 BTNL8Q6UX41 500 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 SLC16A13Q7RTY0 426 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 WDR89Q96FK6 387 aaPredicted RBP12.68□□□□□ -0.38
HMGN4-201ENST00000377575 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
HMGN4-201ENST00000377575 I3L2K1 104 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 NUPL2O15504 423 aaKnown RBP12.67□□□□□ -0.38
HMGN4-201ENST00000377575 MT-CO2P00403 227 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 C8orf88P0DMB2 117 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
HMGN4-201ENST00000377575 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGN4-201ENST00000377575 MFAP4P55083 255 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 AP3S2P59780 193 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 ANKRD55Q3KP44 614 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 PYDC2Q56P42 97 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 PINX1Q96BK5 328 aaKnown RBP12.67□□□□□ -0.38
HMGN4-201ENST00000377575 TXN2Q99757 166 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 CHRDL1Q9BU40 450 aa12.67□□□□□ -0.38
HMGN4-201ENST00000377575 TRAV25A0A0B4J276 109 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
HMGN4-201ENST00000377575 CORTO00230 105 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 CD7P09564 240 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
HMGN4-201ENST00000377575 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
HMGN4-201ENST00000377575 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
HMGN4-201ENST00000377575 A0A0G2JRQ6 117 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 OR11H12B2RN74 326 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 SCAF4O95104 1147 aaKnown RBP12.65□□□□□ -0.38
HMGN4-201ENST00000377575 ADMP35318 185 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 TMEM268Q5VZI3 342 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 SELENOHQ8IZQ5 122 aaKnown RBP12.65□□□□□ -0.38
HMGN4-201ENST00000377575 OR52B4Q8NGK2 314 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 LHFPL5Q8TAF8 219 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.65□□□□□ -0.38
HMGN4-201ENST00000377575 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 SELENOKQ9Y6D0 94 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 V9GYH0 126 aa12.65□□□□□ -0.38
HMGN4-201ENST00000377575 C15orf62A8K5M9 175 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 K7EMT4 169 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 GNG7O60262 68 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 CTSGP08311 255 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 ETV6P41212 452 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 SPCS3P61009 180 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 HAGHQ16775 308 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 AARDQ4LEZ3 155 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 TOMM5Q8N4H5 51 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 OR52E5Q8NH55 327 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 IL22RA2Q969J5 263 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 TRIM63Q969Q1 353 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 GALNT14Q96FL9 552 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 SRD5A3Q9H8P0 318 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 TMEM56-RWDD3S4R434 201 aa12.64□□□□□ -0.39
HMGN4-201ENST00000377575 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
HMGN4-201ENST00000377575 ANXA3P12429 323 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 NPBWR1P48145 328 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 KLF9Q13886 244 aaPredicted RBP12.63□□□□□ -0.39
HMGN4-201ENST00000377575 LAMTOR1Q6IAA8 161 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
HMGN4-201ENST00000377575 WFDC10AQ9H1F0 79 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
HMGN4-201ENST00000377575 IGHV3OR16-8A0A075B7F1 116 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 PIGBOS1A0A0B4J2F0 54 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 YIF1AO95070 293 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 IGHV3-48P01763 117 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 AKR1C4P17516 323 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 SRPXP78539 464 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 TMEM187Q14656 261 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 ZNF79Q15937 498 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 SPANXN2Q5MJ10 180 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 PVRIGQ6DKI7 326 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 Q6ZRM9 215 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 TMEM230Q96A57 120 aa12.62□□□□□ -0.39
HMGN4-201ENST00000377575 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
HMGN4-201ENST00000377575 TSPAN4O14817 238 aa12.61□□□□□ -0.39
HMGN4-201ENST00000377575 ZNF207O43670 478 aaKnown RBP12.61□□□□□ -0.39
HMGN4-201ENST00000377575 OPRK1P41145 380 aa12.61□□□□□ -0.39
HMGN4-201ENST00000377575 CCDC190Q86UF4 302 aa12.61□□□□□ -0.39
HMGN4-201ENST00000377575 GPR146Q96CH1 333 aa12.61□□□□□ -0.39
HMGN4-201ENST00000377575 OR10C1Q96KK4 312 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms