RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 PEAR1Q5VY43 1037 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 FAM159AQ6UWV7 190 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 C1QL2Q7Z5L3 287 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 CLEC7AQ9BXN2 247 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 ATP5G3P48201 142 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 VCX2Q9H322 139 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 RPP21Q9H633 154 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 TRAV24A0A0B4J272 114 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 CLDN16Q9Y5I7 305 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 Q6AWC8 147 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 EEF1AKMT3Q96AZ1 226 aa10.35□□□□□ -0.75
NPLOC4-202ENST00000374747 GPR179Q6PRD1 2367 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 IZUMO1RA6ND01 250 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 IGFBP2P18065 325 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 RPL39P5Q59GN2 51 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 FOXC2Q99958 501 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 SERF1AO75920 110 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 CLEC2AQ6UVW9 174 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 OSR1Q8TAX0 266 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 ELOVL5Q9NYP7 299 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 A0A1B0GTI1 187 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 WDR82Q6UXN9 313 aa10.34□□□□□ -0.75
NPLOC4-202ENST00000374747 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 GPR183P32249 361 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 ZNF525Q8N782 197 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 FREM3P0C091 2139 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 ACSF3Q4G176 576 aaPredicted RBP10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 BTCP35070 178 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 TEX45Q8NA69 505 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 IGKV1D-43A0A0B4J1Z2 117 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 NPFFO15130 113 aa10.33□□□□□ -0.76
NPLOC4-202ENST00000374747 H7C1H1 209 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 C1orf162Q8NEQ5 155 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 APC2O95996 2303 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 SNRPD3P62318 126 aaKnown RBP10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 CIARTQ8N365 385 aaPredicted RBP10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 C17orf98A8MV24 154 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 H3BUT2 72 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 UBE2CO00762 179 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 LHX2P50458 406 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 TIMM23BQ5SRD1 257 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 OR52E5Q8NH55 327 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 ABHD17AQ96GS6 310 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 CEP250Q9BV73 2442 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 SYNGR3O43761 229 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 CEACAM4O75871 244 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 ASIPP42127 132 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 PLAURQ03405 335 aa10.32□□□□□ -0.76
NPLOC4-202ENST00000374747 A0A087WV48 116 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 M0R381 172 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 NUDT11Q96G61 164 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 RNF126Q9BV68 326 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 TMEM106BQ9NUM4 274 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 TYMSP04818 313 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 ACP7Q6ZNF0 438 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 ZNRF1Q8ND25 227 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 FOXD3Q9UJU5 478 aaPredicted RBP10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 APOMO95445 188 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 PNKDQ8N490 385 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 MESP1Q9BRJ9 268 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 TICRRQ7Z2Z1 1910 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 PROB1E7EW31 1015 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 F8VVB4 439 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 F8VWA3 439 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 TMEM50AO95807 157 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 FAM57AQ8TBR7 257 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 DEPPQ9NTK1 212 aa10.31□□□□□ -0.76
NPLOC4-202ENST00000374747 IGHV3-35A0A0C4DH35 117 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BKO60814 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BJP06899 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BOP23527 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BBP33778 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 ADMP35318 185 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BDP58876 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BCP62807 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 SRSF3P84103 164 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST2H2BEQ16778 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BHQ93079 126 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 DUX5Q96PT3 197 aa10.3□□□□□ -0.76
NPLOC4-202ENST00000374747 HIST1H2BNQ99877 126 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms