RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 DNLZQ5SXM8 178 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 AP5S1Q9NUS5 200 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 COL4A3Q01955 1670 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 OR10J3Q5JRS4 329 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 PMCHL2Q9BQD1 86 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 MGPP08493 103 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 MAP1LC3AQ9H492 121 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 PRDM13Q9H4Q3 707 aa14.47□□□□□ -0.09
PTPRU-202ENST00000373779 CACNA1DQ01668 2161 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 IGHV1-69-2A0A0G2JMI3 117 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 ZNF324O75467 553 aaPredicted RBP14.46□□□□□ -0.09
PTPRU-202ENST00000373779 MGST2Q99735 147 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 BMPERQ8N8U9 685 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 PTPRZ1P23471 2315 aaPredicted RBP14.46□□□□□ -0.09
PTPRU-202ENST00000373779 HERVK_113P61574 105 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 ARF6P62330 175 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
PTPRU-202ENST00000373779 RALYQ9UKM9 306 aaKnown RBP14.46□□□□□ -0.09
PTPRU-202ENST00000373779 IGHV1-18A0A0C4DH31 117 aa14.46□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF207O43670 478 aaKnown RBP14.46□□□□□ -0.1
PTPRU-202ENST00000373779 NDUFS6O75380 124 aaKnown RBP14.46□□□□□ -0.1
PTPRU-202ENST00000373779 LAMTOR2Q9Y2Q5 125 aa14.46□□□□□ -0.1
PTPRU-202ENST00000373779 IL4P05112 153 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 TMEM78Q5T7P6 136 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 SPATA31B1PQ5VZV4 182 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 TMEM50AO95807 157 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 GPR82Q96P67 336 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 IGHV2-5P01817 119 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 RPL7P18124 248 aaKnown RBP14.45□□□□□ -0.1
PTPRU-202ENST00000373779 CD69Q07108 199 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF585BQ52M93 769 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 LURAP1LQ8IV03 231 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 ELOVL5Q9NYP7 299 aa14.45□□□□□ -0.1
PTPRU-202ENST00000373779 PAX9P55771 341 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 GNG5P63218 68 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF841Q6ZN19 808 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 RABAC1Q9UI14 185 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 FABP2P12104 132 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 PCP4P48539 62 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 RSPO1Q2MKA7 263 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-202ENST00000373779 C1orf194Q5T5A4 169 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 COLCA1Q6ZS62 124 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 ST6GALNAC6Q969X2 333 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 THADAQ6YHU6 1953 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 LINC00473A8K010 186 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 IGLV3-1P01715 115 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 TMEM256Q8N2U0 113 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 FOXA2Q9Y261 457 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-202ENST00000373779 TPRP12270 2363 aaKnown RBP14.44□□□□□ -0.1
PTPRU-202ENST00000373779 NUP210Q8TEM1 1887 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-202ENST00000373779 C9JCJ5 164 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 TNFSF13O75888 250 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 PYYP10082 97 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 TMEM105Q8N8V8 129 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 Q9H3A6 140 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 RNF115Q9Y4L5 304 aa14.44□□□□□ -0.1
PTPRU-202ENST00000373779 RBPMS2Q6ZRY4 209 aaKnown RBP14.43□□□□□ -0.1
PTPRU-202ENST00000373779 PNKDQ8N490 385 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 BEND2Q8NDZ0 799 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 SSBP4Q9BWG4 385 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-202ENST00000373779 SRRM5B3KS81 715 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 CCL21O00585 134 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 SRSF9Q13242 221 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRU-202ENST00000373779 A0A1B0GUT8 65 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 CCL3L1P16619 93 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 RELQ04864 619 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-202ENST00000373779 SEPSECSQ9HD40 501 aaKnown RBP14.43□□□□□ -0.1
PTPRU-202ENST00000373779 METRNQ9UJH8 293 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 ANOS1P23352 680 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 TCF24Q7RTU0 167 aa14.43□□□□□ -0.1
PTPRU-202ENST00000373779 C15orf62A8K5M9 175 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 GZMBP10144 247 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 RAB37Q96AX2 223 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 APOHP02749 345 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-202ENST00000373779 CD177Q8N6Q3 437 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 TEX45Q8NA69 505 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 FBXL15Q9H469 300 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 IGKV3-7A0A075B6H7 116 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 COQ2Q96H96 371 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 UBTD1Q9HAC8 227 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 TCRBV4S1A1TA0A5B7 111 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 FAM106CPP0CH98 169 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF124Q15973 351 aa14.42□□□□□ -0.1
PTPRU-202ENST00000373779 MBNL2Q5VZF2 373 aaKnown RBP14.42□□□□□ -0.1
PTPRU-202ENST00000373779 TRAV3A0A0B4J244 114 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 GCSHP23434 173 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 NUTF2P61970 127 aaKnown RBP14.41□□□□□ -0.1
PTPRU-202ENST00000373779 ZNF664Q8N3J9 261 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 EPDR1Q9UM22 224 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 FOXI3A8MTJ6 420 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-202ENST00000373779 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 PROK2Q9HC23 129 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 CIDEAO60543 219 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 FOXH1O75593 365 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 TMEM136Q6ZRR5 245 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 LYPD6BQ8NI32 183 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 SAPCD1Q5SSQ6 148 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 METTL26Q96S19 204 aa14.41□□□□□ -0.1
PTPRU-202ENST00000373779 NUDT3O95989 172 aa14.4□□□□□ -0.1
PTPRU-202ENST00000373779 CA1P00915 261 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms