RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 BSXQ3C1V8 233 aa13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 LHFPL5Q8TAF8 219 aa13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR10C1Q96KK4 312 aa13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 NXF2Q9GZY0 626 aaKnown RBP13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 BATF3Q9NR55 127 aa13.41□□□□□ -0.26
TRAPPC3-202ENST00000373162 DNAH1Q9P2D7 4330 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 EPPK1P58107 5090 aaKnown RBP13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 RGS5O15539 181 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 ST8SIA3O43173 380 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 MT-CO2P00403 227 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 SURF2Q15527 256 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 SP6Q3SY56 376 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 Q6ZRM9 215 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 OR4C16Q8NGL9 310 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 ZFAND1Q8TCF1 268 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 TXN2Q99757 166 aa13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 SPAG8Q99932 426 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC3-202ENST00000373162 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 GSTZ1O43708 216 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 B3GALNT1O75752 331 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 CDS2O95674 445 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 LYL1P12980 280 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 MEF2DQ14814 521 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 SLC16A13Q7RTY0 426 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 OR52B4Q8NGK2 314 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 MCFD2Q8NI22 146 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 C6orf62Q9GZU0 229 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 RABL2AQ9UBK7 228 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 RABL2BQ9UNT1 228 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 GPR132Q9UNW8 380 aa13.39□□□□□ -0.27
TRAPPC3-202ENST00000373162 ANKRD20A5PA0PJZ0 165 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 RNASE2P10153 161 aaKnown RBP13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 MFAP4P55083 255 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 ODF3L2Q3SX64 289 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 FAM110AQ9BQ89 295 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
TRAPPC3-202ENST00000373162 IGHV3OR16-8A0A075B7F1 116 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 OR5AC1P0C628 307 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 AKR1C2P52895 323 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 Q56UQ5 140 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 FAM90A2PQ658T7 463 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 MISP3Q96FF7 219 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
TRAPPC3-202ENST00000373162 CRYM-AS1A6NIL9 109 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 AKAIN1P0CW23 69 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 UBAC2Q8NBM4 344 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 TMEM230Q96A57 120 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 NAA60Q9H7X0 242 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 ZFAND3Q9H8U3 227 aa13.36□□□□□ -0.27
TRAPPC3-202ENST00000373162 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 CHEK1O14757 476 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 ATG12O94817 140 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 TNFSF8P32971 234 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 RELQ04864 619 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 IL18Q14116 193 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 TRIM16LQ309B1 348 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 RBPMS2Q6ZRY4 209 aaKnown RBP13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 C20orf24Q9BUV8 137 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 GGTLC1Q9BX51 225 aa13.35□□□□□ -0.27
TRAPPC3-202ENST00000373162 TEX13DA0A0J9YY54 714 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 DISC1C4P0D8 188 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 NUPL2O15504 423 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 ETV6P41212 452 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 SELENOHQ8IZQ5 122 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 SLC35G3Q8N808 338 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 OR51S1Q8NGJ8 323 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 OR52E5Q8NH55 327 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 RBPMSQ93062 196 aaKnown RBP13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 TRIM63Q969Q1 353 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 GALNT14Q96FL9 552 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 RNF2Q99496 336 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 OVOL2Q9BRP0 275 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 TMEM56-RWDD3S4R434 201 aa13.34□□□□□ -0.27
TRAPPC3-202ENST00000373162 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 LCE6AA0A183 80 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 CNPY1Q3B7I2 92 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 TOMM20LQ6UXN7 152 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 PINX1Q96BK5 328 aaKnown RBP13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 PRRT1Q99946 306 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 VSIRQ9H7M9 311 aa13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 C14orf166Q9Y224 244 aaKnown RBP13.33□□□□□ -0.28
TRAPPC3-202ENST00000373162 BIRC6Q9NR09 4857 aa13.32□□□□□ -0.28
TRAPPC3-202ENST00000373162 TMEM50AO95807 157 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms