RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 UBE2CO00762 179 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 IFNA17P01571 189 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 CTSDP07339 412 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-201ENST00000372235 ALDH3B2P48448 385 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 SCGB2B2Q4G0G5 96 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 RNASE11Q8TAA1 199 aaKnown RBP14.13□□□□□ -0.15
TMEM53-201ENST00000372235 GINS3Q9BRX5 216 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 C6orf62Q9GZU0 229 aaPredicted RBP14.13□□□□□ -0.15
TMEM53-201ENST00000372235 WFDC10AQ9H1F0 79 aa14.13□□□□□ -0.15
TMEM53-201ENST00000372235 IGHV3-21A0A0B4J1V1 117 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 F8W735 103 aaPredicted RBP14.12□□□□□ -0.15
TMEM53-201ENST00000372235 CTDSPLO15194 276 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 NOL3O60936 208 aaKnown RBP14.12□□□□□ -0.15
TMEM53-201ENST00000372235 YIF1AO95070 293 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 MT-CO2P00403 227 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 ADMP35318 185 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 PPP5CP53041 499 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 TMBIM6P55061 237 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 ZFAND6Q6FIF0 208 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 OR10C1Q96KK4 312 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 TP53RKQ96S44 253 aa14.12□□□□□ -0.15
TMEM53-201ENST00000372235 NXF2Q9GZY0 626 aaKnown RBP14.12□□□□□ -0.15
TMEM53-201ENST00000372235 TRAV14DV4A0A0A6YYC5 116 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 PI3P19957 117 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 UCP1P25874 307 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 PAFAH1B2P68402 229 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 TMEM116Q8NCL8 245 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 SMIM4Q8WVI0 70 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 PINX1Q96BK5 328 aaKnown RBP14.11□□□□□ -0.15
TMEM53-201ENST00000372235 CCDC59Q9P031 241 aaKnown RBP14.11□□□□□ -0.15
TMEM53-201ENST00000372235 SMPXQ9UHP9 88 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 TP53TG1Q9Y2A0 90 aa14.11□□□□□ -0.15
TMEM53-201ENST00000372235 KIR2DL5BA0A0G2JN68 375 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 KIR2DL5BA0A0G2JPC4 375 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 IGHV7-4-1A0A0J9YVY3 117 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 DHODHQ02127 395 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 Q6ZWC4 215 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 KIR2DL5AQ8N109 375 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 OR13C8Q8NGS7 320 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 KIR2DL5BQ8NHK3 375 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 DIRAS2Q96HU8 199 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 SCGB3A2Q96PL1 93 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 PRRT1Q99946 306 aa14.1□□□□□ -0.15
TMEM53-201ENST00000372235 A0A0B4J293 547 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 TEX13DA0A0J9YY54 714 aaPredicted RBP14.09□□□□□ -0.15
TMEM53-201ENST00000372235 LCE6AA0A183 80 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 ST8SIA3O43173 380 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 IGKV1-5P01602 117 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 P0C879 139 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 AKAIN1P0CW23 69 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 HOXA1P49639 335 aaPredicted RBP14.09□□□□□ -0.15
TMEM53-201ENST00000372235 IL18Q14116 193 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 CLVS1Q8IUQ0 354 aaPredicted RBP14.09□□□□□ -0.15
TMEM53-201ENST00000372235 OR52E5Q8NH55 327 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 RHPN1-AS1Q9BWJ2 59 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 RETNQ9HD89 108 aa14.09□□□□□ -0.15
TMEM53-201ENST00000372235 RSL24D1Q9UHA3 163 aaKnown RBP14.09□□□□□ -0.15
TMEM53-201ENST00000372235 CDS2O95674 445 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 STPG3Q8N7X2 389 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 OR4D10Q8NGI6 311 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 MARCH1Q8TCQ1 289 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 GALNT14Q96FL9 552 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 TMEM222Q9H0R3 208 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 MIXL1Q9H2W2 232 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 TMEM231Q9H6L2 316 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.08□□□□□ -0.16
TMEM53-201ENST00000372235 SCP2D1Q9UJQ7 156 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 SELENOKQ9Y6D0 94 aa14.08□□□□□ -0.16
TMEM53-201ENST00000372235 NBEAL2Q6ZNJ1 2754 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 RPS10-NUDT3A0A1W2PQS6 291 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 CTDSP2O14595 271 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 CHEK1O14757 476 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 JTBO76095 146 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 RPL5P46777 297 aaKnown RBP14.07□□□□□ -0.16
TMEM53-201ENST00000372235 SPCS3P61009 180 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 SPCS2Q15005 226 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 SP6Q3SY56 376 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 WFDC3Q8IUB2 231 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 RBPMSQ93062 196 aaKnown RBP14.07□□□□□ -0.16
TMEM53-201ENST00000372235 KCNIP3Q9Y2W7 256 aa14.07□□□□□ -0.16
TMEM53-201ENST00000372235 TRAV30A0A087WSZ9 112 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 ZNF207O43670 478 aaKnown RBP14.06□□□□□ -0.16
TMEM53-201ENST00000372235 HTR2BP41595 481 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 PVRIGQ6DKI7 326 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 NOXA1Q86UR1 476 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 RNF2Q99496 336 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 NAA60Q9H7X0 242 aa14.06□□□□□ -0.16
TMEM53-201ENST00000372235 A0A1W2PS18 150 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 GSTZ1O43708 216 aaPredicted RBP14.05□□□□□ -0.16
TMEM53-201ENST00000372235 OR5AC1P0C628 307 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 ETV6P41212 452 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 AARDQ4LEZ3 155 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 TMEM217Q8N7C4 229 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 DYNC2LI1Q8TCX1 351 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 NARS2Q96I59 477 aaKnown RBP14.05□□□□□ -0.16
TMEM53-201ENST00000372235 OVOL2Q9BRP0 275 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 UBQLN2Q9UHD9 624 aa14.05□□□□□ -0.16
TMEM53-201ENST00000372235 GPR132Q9UNW8 380 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms