RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CD69Q07108 199 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 C2orf83Q53S99 150 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 TNFRSF14Q92956 283 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 GPR82Q96P67 336 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 PCNX1Q96RV3 2341 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 LOC102724200A0A096LPH7 203 aaPredicted RBP9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 SLC17A3O00476 420 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 FOXF2Q12947 444 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 ZNF841Q6ZN19 808 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 NEU1Q99519 415 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 E9PLN8 166 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 IGKV1D-33P01593 117 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 IGKV1-33P01594 117 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 VKORC1Q9BQB6 163 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 FER1L5A0AVI2 2057 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 PSPNO60542 156 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 Q6AWC8 147 aa9.87□□□□□ -0.83
DEPDC1-201ENST00000370966 MYLKQ15746 1914 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 A0A1B0GW64 132 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 CGB1A6NKQ9 187 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 IGHV1-46P01743 117 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 TEX45Q8NA69 505 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 ZNF257Q9Y2Q1 563 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 PPP1R27Q86WC6 154 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 FMC1Q96HJ9 113 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 FBXL7Q9UJT9 491 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 LRRK1Q38SD2 2015 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 NDUFS6O75380 124 aaKnown RBP9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 GATA2P23769 480 aaPredicted RBP9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 TFPI2P48307 235 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 PSMB2P49721 201 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 RNF144BQ7Z419 303 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 FOXA2Q9Y261 457 aaPredicted RBP9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 ANAPC1Q9H1A4 1944 aa9.86□□□□□ -0.83
DEPDC1-201ENST00000370966 IGHV3-35A0A0C4DH35 117 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 OR9G9P0C7N8 305 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 ARPC1AQ92747 370 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 PLXNA4Q9HCM2 1894 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 A0A1B0GW15 77 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 DPRXA6NFQ7 191 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 NPIPB6E9PJ23 425 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 ATXN7O15265 892 aaPredicted RBP9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 TSPOP30536 169 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 CIARTQ8N365 385 aaPredicted RBP9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 GPX1P07203 203 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 STAG3L2P0CL84 134 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 VOPP1Q96AW1 172 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 WNT10AQ9GZT5 417 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 NBR2O15453 112 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM14EPQ6UXP3 125 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 HEPN1Q6WQI6 88 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 SLC25A15Q9Y619 301 aa9.85□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 C5orf52A6NGY3 159 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 A6NJY4 79 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 CIDEAO60543 219 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 IGHG3P01860 377 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 LYL1P12980 280 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM170AQ8WVE7 144 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 WFIKKN1Q96NZ8 548 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 REG4Q9BYZ8 158 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 C1QTNF9BB2RNN3 333 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 K7ERU9 68 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 FOXA3P55318 350 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 EFNB3Q15768 340 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 FANCMQ8IYD8 2048 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TTC28Q96AY4 2481 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 ABCA4P78363 2273 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 A0A0G2JLM5 398 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 M0R3E3 92 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 IGKV1-5P01602 117 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TRGV3P03979 118 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 LY6EQ16553 131 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 PVRIGQ6DKI7 326 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 TMEM136Q6ZRR5 245 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 ZNF502Q8TBZ5 544 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 DDB2Q92466 427 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 CHODLQ9H9P2 273 aa9.84□□□□□ -0.83
DEPDC1-201ENST00000370966 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 OR4C46A6NHA9 309 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 FOXI3A8MTJ6 420 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 COLCA1Q6ZS62 124 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 NUDT3O95989 172 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 OTORQ9NRC9 128 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 TFF1P04155 84 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 FAM53AQ6NSI3 398 aaPredicted RBP9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 Q6P435 159 aa9.83□□□□□ -0.84
DEPDC1-201ENST00000370966 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms