RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 GAGE2AQ6NT46 116 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 TGIF2LXQ8IUE1 241 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 SLC35G3Q8N808 338 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 IL22RA2Q969J5 263 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ADTRPQ96IZ2 230 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 RAB18Q9NP72 206 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 YAE1D1Q9NRH1 226 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 DPM3Q9P2X0 92 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 GAGE2DQ9UEU5 116 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 HILPDAQ9Y5L2 63 aa2.83□□□□□ -1.96
MCF2-202ENST00000370573 ANK3Q12955 4377 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 IGHV1-69DA0A0B4J2H0 117 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TMEM89A2RUT3 159 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 NPFFO15130 113 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 RBFOX2O43251 390 aaKnown RBP eCLIP2.82□□□□□ -1.96
MCF2-202ENST00000370573 KRASP01116 189 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 IGHV1-69P01742 117 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 GAPDHP04406 335 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 IL3RAP26951 378 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 G6PCP35575 357 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 MEOX2P50222 304 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 SRPXP78539 464 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 SSX2Q16385 188 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 FAM120AOSQ5T036 256 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 FAM71F2Q6NXP2 309 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 IL17RELQ6ZVW7 336 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 MOB3BQ86TA1 216 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 ZNF695Q8IW36 515 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 VKORC1L1Q8N0U8 176 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TCTEX1D1Q8N7M0 179 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 RBPMSQ93062 196 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 C12orf57Q99622 126 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 BIN3Q9NQY0 253 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 MSRB1Q9NZV6 116 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 AMMECR1Q9Y4X0 333 aaPredicted RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 HIVEP1P15822 2718 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TNCP24821 2201 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TRAV14DV4A0A0A6YYC5 116 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 PCP4L1A6NKN8 68 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 CYSRT1A8MQ03 144 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 J3QLI3 93 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 PITX3O75364 302 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 HPRT1P00492 218 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 IGLV2-23P01705 113 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 S100A9P06702 114 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 GIPP09681 153 aaPredicted RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 OR9G9P0C7N8 305 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 VDAC1P21796 283 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 CD24P25063 80 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 SAA4P35542 130 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 KIR2DS2P43631 304 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 NKX2-5P52952 324 aaPredicted RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 IAH1Q2TAA2 248 aaPredicted RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 MINOS1Q5TGZ0 78 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 GSG1LQ6UXU4 331 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 BRD3OSQ6XYD6 125 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 OR11H4Q8NGC9 324 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 CD300LFQ8TDQ1 290 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 LSM10Q969L4 123 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 RPEQ96AT9 228 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 MALSU1Q96EH3 234 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 C2orf50Q96LR7 162 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 RNF126Q9BV68 326 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 GSKIPQ9P0R6 139 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 TBL2Q9Y4P3 447 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 MINOS1-NBL1R4GNA1 71 aa2.82□□□□□ -1.96
MCF2-202ENST00000370573 SONP18583 2426 aaKnown RBP2.82□□□□□ -1.96
MCF2-202ENST00000370573 TRAV40A0A0B4J280 105 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 DUXBA0A1W2PPF3 345 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 XKRY2A2RUG3 117 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 H7C2Y5 167 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 VENTXO95231 258 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 IFNA21P01568 189 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 APOA2P02652 100 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 RRASP10301 218 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 CNTFRP26992 372 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 CD1BP29016 333 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 HNF4GQ14541 408 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 POU2AF1Q16633 256 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 MRGPRG-AS1Q2M3A8 158 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 C11orf87Q6NUJ2 197 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 Q6ZSV7 163 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 SSX9Q7RTT3 188 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PDPNQ86YL7 162 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 OR4D5Q8NGN0 318 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 OR2T35Q8NGX2 323 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 OR4S2Q8NH73 311 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PIFOQ8TCI5 191 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 SPAG8Q99932 426 aaPredicted RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 PDCD10Q9BUL8 212 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 NMES1Q9C002 83 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 RANBP3Q9H6Z4 567 aaPredicted RBP2.81□□□□□ -1.96
MCF2-202ENST00000370573 COA4Q9NYJ1 87 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 COMMD9Q9P000 198 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 WASHC3Q9Y3C0 194 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 MMP24Q9Y5R2 645 aa2.81□□□□□ -1.96
MCF2-202ENST00000370573 PLXNB1O43157 2135 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms