RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 HBA1P69905 142 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 STX5Q13190 355 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 OR2F1Q13607 317 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 RPL22L1Q6P5R6 122 aaKnown RBP0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 CLVS1Q8IUQ0 354 aaPredicted RBP0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 PFN4Q8NHR9 129 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 MCFD2Q8NI22 146 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 PPP1R2P1Q96PQ5 205 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 SCGB3A1Q96QR1 104 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 PARD6GQ9BYG4 376 aaPredicted RBP0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 C11orf68Q9H3H3 251 aaKnown RBP0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 FBXL12Q9NXK8 326 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 WRNQ14191 1432 aaPredicted RBP eCLIP0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 DOCK3Q8IZD9 2030 aa0.94□□□□□ -2.26
RNU6-560P-201ENST00000364007 FBN2P35556 2912 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 GEMIN2O14893 280 aaKnown RBP0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 HLA-DRB1P01911 266 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 CTSDP07339 412 aaPredicted RBP0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 SPI1P17947 270 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 UBE2IP63279 158 aaKnown RBP0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 KCNJ8Q15842 424 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 SPANXN3Q5MJ09 141 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 TEX36Q5VZQ5 186 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 Q6ZQT0 140 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 ZNF826PQ6ZT77 177 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 LRRC25Q8N386 305 aaPredicted RBP0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 SLC50A1Q9BRV3 221 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 TRABDQ9H4I3 376 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 OR5AC2Q9NZP5 309 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 CKLFQ9UBR5 152 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 TAF1LQ8IZX4 1826 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 MTUS2Q5JR59 1369 aa0.93□□□□□ -2.26
RNU6-560P-201ENST00000364007 PSMD12O00232 456 aaPredicted RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 FAAHO00519 579 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 FADS1O60427 444 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 OR5F1O95221 314 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 HTR1AP08908 422 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 HIST1H1TP22492 207 aaPredicted RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 RPL5P46777 297 aaKnown RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 RPS20P60866 119 aaKnown RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 MAGOHP61326 146 aaKnown RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 SNRPD2P62316 118 aaKnown RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 CDK10Q15131 360 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 HIST3H3Q16695 136 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 C12orf29Q8N999 325 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 OR4C6Q8NH72 309 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 DNAJC9Q8WXX5 260 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 IMP4Q96G21 291 aaKnown RBP0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 GINS4Q9BRT9 223 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 SNURFQ9Y675 71 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 LAMA4Q16363 1823 aa0.92□□□□□ -2.26
RNU6-560P-201ENST00000364007 FUOMA2VDF0 154 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 DPRXA6NFQ7 191 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 CD79AP11912 226 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 OR13C4Q8NGS5 318 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 TERB2Q8NHR7 220 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 PRTFDC1Q9NRG1 225 aa0.91□□□□□ -2.26
RNU6-560P-201ENST00000364007 OBSL1O75147 1896 aa0.9□□□□□ -2.26
RNU6-560P-201ENST00000364007 ZFC3H1O60293 1989 aaKnown RBP0.9□□□□□ -2.26
RNU6-560P-201ENST00000364007 TRAV1-1A0A0B4J248 108 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 CHP2O43745 196 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 AHSA1O95433 338 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 ASAH2BP0C7U1 165 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 MIR17HGQ75NE6 70 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 LINC00471Q8N535 108 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 ANKRD29Q8N6D5 301 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 H1FXQ92522 213 aaKnown RBP0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 NIPSNAP1Q9BPW8 284 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 PLXNA4Q9HCM2 1894 aa0.9□□□□□ -2.27
RNU6-560P-201ENST00000364007 SCN8AQ9UQD0 1980 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 EXOC1LA0A1B0GW35 172 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 C2orf70A6NJV1 201 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 BUB1B-PAK6H3BSN5 160 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 BRS3P32247 399 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 PSME3P61289 254 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 DEFB115Q30KQ5 88 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 KHDC3LQ587J8 217 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 LPCAT3Q6P1A2 487 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 DEFB128Q7Z7B8 93 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 C20orf196Q8IYI0 205 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR4D11Q8NGI4 311 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 TSPAN32Q96QS1 320 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR52E6Q96RD3 313 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 COMMD5Q9GZQ3 224 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 KIF1BO60333 1816 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 RIC1Q4ADV7 1423 aa0.89□□□□□ -2.27
RNU6-560P-201ENST00000364007 SNRNP200O75643 2136 aaKnown RBP0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 HEATR1Q9H583 2144 aaKnown RBP0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 IFNA16P05015 189 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 SULT1A1P50225 295 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 CCDC122Q5T0U0 273 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 SPOPLQ6IQ16 392 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 FAM19A2Q8N3H0 131 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 LINC00311Q8N616 119 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR4E2Q8NGC2 313 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR52R1Q8NGF1 315 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR5A1Q8NGJ0 315 aa0.88□□□□□ -2.27
RNU6-560P-201ENST00000364007 NUP155O75694 1391 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms