RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 C5orf51A6NDU8 294 aa13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 MFSD2BA6NFX1 497 aa13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 INS-IGF2F8WCM5 200 aa13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 CCL24O00175 119 aa13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 RNASE2P10153 161 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 IAPPP10997 89 aa13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 HIST1H1BP16401 226 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-202ENST00000355841 SIX6O95475 246 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 IGHV3-48P01763 117 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 PF4P02776 101 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 KLK9Q2XQG4 91 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 ZNF114Q8NC26 417 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 OR4D5Q8NGN0 318 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 KLK9Q9UKQ9 250 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 ALG5Q9Y673 324 aa13.81□□□□□ -0.2
PDLIM7-202ENST00000355841 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 A0A087WW49 117 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 GOSR2O14653 212 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 SSNA1O43805 119 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 ZNF343Q6P1L6 599 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 OR1N2Q8NGR9 330 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 HIPK2Q9H2X6 1198 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
PDLIM7-202ENST00000355841 NKX2-1P43699 371 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 RUNX1Q01196 453 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 BSXQ3C1V8 233 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 CCDC140Q96MF4 163 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 RANGRFQ9HD47 186 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 THYN1Q9P016 225 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 C7orf66A4D0T2 115 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 K7EIM0 57 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 WRBO00258 174 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 CYB5BO43169 146 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 SYNGR2O43760 224 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 C1QBP02746 253 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 HTR2BP41595 481 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 ID3Q02535 119 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 PRR31Q5SQ13 230 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 CLEC19AQ6UXS0 136 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 GSG1LQ6UXU4 331 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 SCARB1Q8WTV0 552 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 ZC4H2Q9NQZ6 224 aa13.79□□□□□ -0.2
PDLIM7-202ENST00000355841 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 IFNA10P01566 189 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 RRAS2P62070 204 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 ZNF616Q08AN1 781 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 MLANAQ16655 118 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 DPF1Q92782 380 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 EEF1AKMT3Q96AZ1 226 aa13.78□□□□□ -0.2
PDLIM7-202ENST00000355841 I3L2K1 104 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 SSSCA1O60232 199 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 MED6O75586 246 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 MT-CO2P00403 227 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 MBPP02686 304 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 HSPB1P04792 205 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 MYCNOSP40205 109 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 SLURP1P55000 103 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 WDR89Q96FK6 387 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 C2orf50Q96LR7 162 aa13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 PEF1Q9UBV8 284 aaKnown RBP13.77□□□□□ -0.21
PDLIM7-202ENST00000355841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 H3BP45 60 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 NPY1RP25929 384 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 FHL3Q13643 280 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 TREML4Q6UXN2 200 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 UBAC2Q8NBM4 344 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 ZNF502Q8TBZ5 544 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 CXorf58Q96LI9 332 aa13.76□□□□□ -0.21
PDLIM7-202ENST00000355841 LINC01619G3V211 115 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 TMEM50AO95807 157 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 CLEC3BP05452 202 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 H2BFSP57053 126 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 C2orf83Q53S99 150 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 PVRIGQ6DKI7 326 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 LINC00482Q8N8I6 264 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 VN1R17PQ8TDU5 208 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 RCL1Q9Y2P8 373 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 U3KQ87 197 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 TRBV7-1A0A0A6YYK4 115 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 BMPR1BO00238 502 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 GPR183P32249 361 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 OPRK1P41145 380 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 OR4C12Q96R67 309 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 C21orf62Q9NYP8 219 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 LSM5Q9Y4Y9 91 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-202ENST00000355841 OR2T8A6NH00 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms