RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 AGMATQ9BSE5 352 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 SS18L2Q9UHA2 77 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 J3QT63 122 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 CLDN14O95500 239 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 FAM71F2Q6NXP2 309 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 STXBP6Q8NFX7 210 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 PSG4Q00888 419 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 ZNF138P52744 262 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 TMEM144Q7Z5S9 345 aa12.72□□□□□ -0.37
COG3-201ENST00000349995 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 ZC2HC1AQ96GY0 325 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 OSTCQ9NRP0 149 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 ZNF716A6NP11 495 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 F2Z2F3 143 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 SYS1-DBNDD2H3BUS1 97 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 RBX1P62877 108 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 TUSC5Q8IXB3 177 aa12.71□□□□□ -0.37
COG3-201ENST00000349995 SH2D7A6NKC9 451 aaPredicted RBP12.71□□□□□ -0.38
COG3-201ENST00000349995 PRSS2P07478 247 aa12.71□□□□□ -0.38
COG3-201ENST00000349995 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.38
COG3-201ENST00000349995 FAM27BQ5VT28 67 aa12.71□□□□□ -0.38
COG3-201ENST00000349995 SNRNP40Q96DI7 357 aaKnown RBP12.71□□□□□ -0.38
COG3-201ENST00000349995 TCF19Q9Y242 345 aa12.71□□□□□ -0.38
COG3-201ENST00000349995 RBPJQ06330 500 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 THADAQ6YHU6 1953 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
COG3-201ENST00000349995 PHF3Q92576 2039 aaKnown RBP12.7□□□□□ -0.38
COG3-201ENST00000349995 TRAV5A0A0B4J249 113 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 F5H697 171 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 IGFBP2P18065 325 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 OR5P3Q8WZ94 311 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 COL6A6A6NMZ7 2263 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 SPAARA0A1B0GVQ0 90 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 PRR19A6NJB7 356 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
COG3-201ENST00000349995 CHTOPQ9Y3Y2 248 aaKnown RBP12.7□□□□□ -0.38
COG3-201ENST00000349995 CREBBPQ92793 2442 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 IGHV1-45A0A0A0MS14 117 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 PRTN3P24158 256 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 HOXA4Q00056 320 aaPredicted RBP12.7□□□□□ -0.38
COG3-201ENST00000349995 KLRB1Q12918 225 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 ZNF645Q8N7E2 425 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 OR2Z1Q8NG97 314 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 MRAP2Q96G30 205 aa12.7□□□□□ -0.38
COG3-201ENST00000349995 FADS6Q8N9I5 356 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 RND1Q92730 232 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 TMEM50AO95807 157 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 OR2H2O95918 312 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 Q0VG73 95 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 FOXC2Q99958 501 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 PRNDQ9UKY0 176 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 HELZP42694 1942 aaKnown RBP12.69□□□□□ -0.38
COG3-201ENST00000349995 TMEM189A5PLL7 270 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 CEACAM18A8MTB9 384 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 SMIM17P0DL12 118 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 MAP1LC3AQ9H492 121 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 PLXND1Q9Y4D7 1925 aa12.69□□□□□ -0.38
COG3-201ENST00000349995 LYZL6O75951 148 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 VMA21Q3ZAQ7 101 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 SARAFQ96BY9 339 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 PRELID3AQ96N28 172 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 ZNF407Q9C0G0 2248 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 PCOLCEQ15113 449 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
COG3-201ENST00000349995 B5MCH6 92 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 CEACAM3P40198 252 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 TRAV26-1A0A087WT03 109 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 C17orf98A8MV24 154 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 J3KRW8 73 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 K7ESF4 209 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 SCGB1A1P11684 91 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 MEF2CQ06413 473 aaPredicted RBP12.68□□□□□ -0.38
COG3-201ENST00000349995 ANXA2RQ3ZCQ2 193 aa12.68□□□□□ -0.38
COG3-201ENST00000349995 CD300EQ496F6 205 aaPredicted RBP12.67□□□□□ -0.38
COG3-201ENST00000349995 GOLT1AQ6ZVE7 132 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 PKDREJQ9NTG1 2253 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 KIR2DS2P43631 304 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 DNM1P46Q6ZS02 220 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 A0A1B0GUT8 65 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 FXYD7P58549 80 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 CX3CL1P78423 397 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 BVES-AS1Q5T3Y7 98 aa12.67□□□□□ -0.38
COG3-201ENST00000349995 KLK10O43240 276 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 ACP1P24666 158 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 SMIM20Q8N5G0 67 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 HARBI1Q96MB7 349 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 HES7Q9BYE0 225 aa12.66□□□□□ -0.38
COG3-201ENST00000349995 PLSCR4Q9NRQ2 329 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms