RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 B2MP61769 119 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 HABP2Q14520 560 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 STPG3Q8N7X2 389 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 ACY3Q96HD9 319 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 FNDC4Q9H6D8 234 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 CHD6Q8TD26 2715 aa17.92■□□□□ 0.46
PDLIM2-203ENST00000339162 LOC102723971A0A1B0GUV8 181 aa17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 MOSP00540 346 aa17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 GATA2P23769 480 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 CDC34P49427 236 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 SRP19P09132 144 aaKnown RBP17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 TMEM88Q6PEY1 159 aa17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 SLC16A13Q7RTY0 426 aa17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 RNF5Q99942 180 aa17.91■□□□□ 0.46
PDLIM2-203ENST00000339162 SNAPINO95295 136 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 BCL2P10415 239 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 TMEM144Q7Z5S9 345 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 CYB561D1Q8N8Q1 229 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 GATAD1Q8WUU5 269 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 SRSF12Q8WXF0 261 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 C20orf24Q9BUV8 137 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 NBR2O15453 112 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 SUB1P53999 127 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 MFAP2P55001 183 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 RAB31Q13636 194 aa17.9■□□□□ 0.46
PDLIM2-203ENST00000339162 VWC2LB2RUY7 222 aa17.89■□□□□ 0.45
PDLIM2-203ENST00000339162 TEX22C9J3V5 150 aa17.89■□□□□ 0.45
PDLIM2-203ENST00000339162 UBE2E1P51965 193 aa17.89■□□□□ 0.45
PDLIM2-203ENST00000339162 SOHLH1Q5JUK2 328 aa17.89■□□□□ 0.45
PDLIM2-203ENST00000339162 A0A1W2PPV4 95 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 FNDC10F2Z333 226 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 CNIH1O95406 144 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 OR10J1P30954 320 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 MAS1LP35410 378 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 KHDC3LQ587J8 217 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 MINOS1Q5TGZ0 78 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 CCDC144NLQ6NUI1 221 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 MISP3Q96FF7 219 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 SMDT1Q9H4I9 107 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 MRPL36Q9P0J6 103 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 MINOS1-NBL1R4GNA1 71 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 IGHV3OR16-10A0A075B7F0 116 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 IGHV3-21A0A0B4J1V1 117 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 HSPB1P04792 205 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 SAA4P35542 130 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 AKR1C3P42330 323 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 RUSC1-AS1Q66K80 236 aa17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 FAM103A1Q9BTL3 118 aaKnown RBP17.88■□□□□ 0.45
PDLIM2-203ENST00000339162 NDUFS8O00217 210 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 RPL29P47914 159 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 CBLN2Q8IUK8 224 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 OR2T10Q8NGZ9 312 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 AJUBAQ96IF1 538 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 SLC35E1Q96K37 410 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 SEPSECSQ9HD40 501 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 NCBP2LA6PVI3 153 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 SEC14L6B5MCN3 397 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 LINC00869P0C866 280 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PRR20EP86478 221 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PRR20CP86479 221 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PRR20DP86480 221 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PRR20BP86481 221 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PRR20AP86496 221 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 PIP4P2Q8N4L2 257 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 RNASEH2CQ8TDP1 164 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 ABHD5Q8WTS1 349 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 SLC45A2Q9UMX9 530 aa17.87■□□□□ 0.45
PDLIM2-203ENST00000339162 ZFHX3Q15911 3703 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 GPX4P36969 197 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 FAM120AOSQ5T036 256 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 SPATA31B1PQ5VZV4 182 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 CACNG8Q8WXS5 425 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 NPIPB3Q92617 1050 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 PUS1Q9Y606 427 aaKnown RBP eCLIP17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 USP9YO00507 2555 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 NPBQ8NG41 125 aa17.86■□□□□ 0.45
PDLIM2-203ENST00000339162 NDUFA3O95167 84 aa17.85■□□□□ 0.45
PDLIM2-203ENST00000339162 FLI1Q01543 452 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-203ENST00000339162 KCNIP2Q9NS61 270 aa17.85■□□□□ 0.45
PDLIM2-203ENST00000339162 ABCA1O95477 2261 aa17.85■□□□□ 0.45
PDLIM2-203ENST00000339162 PTPN13Q12923 2485 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 CENPVL3A0A0U1RRI6 287 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 M0R036 132 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 VAX2Q9UIW0 290 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 POLR3KQ9Y2Y1 108 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 TBL2Q9Y4P3 447 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 DMRT1Q9Y5R6 373 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 OOSP1A8MZH6 123 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 C5orf64Q2M2E5 130 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 AWAT1Q58HT5 328 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 SLC35E3Q7Z769 313 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 MRPL41Q8IXM3 137 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 MALSU1Q96EH3 234 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 SLC25A33Q9BSK2 321 aa17.84■□□□□ 0.45
PDLIM2-203ENST00000339162 SOX15O60248 233 aa17.83■□□□□ 0.45
PDLIM2-203ENST00000339162 IFNA1P01562 189 aa17.83■□□□□ 0.45
PDLIM2-203ENST00000339162 KRTAP10-9P60411 292 aa17.83■□□□□ 0.45
PDLIM2-203ENST00000339162 PAX8Q06710 450 aa17.83■□□□□ 0.45
PDLIM2-203ENST00000339162 FXYD3Q14802 87 aa17.83■□□□□ 0.45
PDLIM2-203ENST00000339162 RBMS3Q6XE24 437 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms