RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
RUNX3-202ENST00000338888 TRGV8A0A0C4DH27 118 aa16.7■□□□□ 0.26
RUNX3-202ENST00000338888 OR2T6Q8NHC8 308 aa16.7■□□□□ 0.26
RUNX3-202ENST00000338888 NANOS1Q8WY41 292 aaKnown RBP16.7■□□□□ 0.26
RUNX3-202ENST00000338888 TMEM70Q9BUB7 260 aa16.7■□□□□ 0.26
RUNX3-202ENST00000338888 hDV102S1A0JD36 115 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 ADH4P08319 380 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 AMMECR1LQ6DCA0 310 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 WIPF2Q8TF74 440 aaPredicted RBP16.69■□□□□ 0.26
RUNX3-202ENST00000338888 TRIB1Q96RU8 372 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 ENY2Q9NPA8 101 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 LOC102724200A0A096LPH7 203 aaPredicted RBP16.69■□□□□ 0.26
RUNX3-202ENST00000338888 MPV17P39210 176 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
RUNX3-202ENST00000338888 COMMD5Q9GZQ3 224 aa16.69■□□□□ 0.26
RUNX3-202ENST00000338888 DUSP3P51452 185 aaPredicted RBP16.68■□□□□ 0.26
RUNX3-202ENST00000338888 ZNF134P52741 427 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 IGKV1OR2-108A0A075B7D4 117 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 MUC21A0A0G2JKD1 596 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 MUC21A0A140T8X8 626 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 C15orf61A6NNL5 157 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 GABRA6Q16445 453 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 MUC21Q5SSG8 566 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 BVES-AS1Q5T3Y7 98 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 URB1-AS1Q96HZ7 61 aa16.68■□□□□ 0.26
RUNX3-202ENST00000338888 IQCF6A8MYZ5 107 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 PRR27Q6MZM9 219 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 C1orf229Q6ZS94 237 aaPredicted RBP16.67■□□□□ 0.26
RUNX3-202ENST00000338888 CORO2AQ92828 525 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 FAM173AQ9BQD7 235 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 SP9P0CG40 484 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 MRPL49Q13405 166 aaKnown RBP16.67■□□□□ 0.26
RUNX3-202ENST00000338888 LINC00173Q6ZV60 143 aa16.67■□□□□ 0.26
RUNX3-202ENST00000338888 SNRNP40Q96DI7 357 aaKnown RBP16.67■□□□□ 0.26
RUNX3-202ENST00000338888 NTN3O00634 580 aaPredicted RBP16.66■□□□□ 0.26
RUNX3-202ENST00000338888 HSPE1P61604 102 aaKnown RBP16.66■□□□□ 0.26
RUNX3-202ENST00000338888 RASL11AQ6T310 242 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 NUDT10Q8NFP7 164 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 MBD6Q96DN6 1003 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 NUDT11Q96G61 164 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 B4GALT7Q9UBV7 327 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 A0A1W2PRE2 83 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 C21orf140B9A014 251 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 TNFSF15O95150 251 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 MLANAQ16655 118 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 TRAT1Q6PIZ9 186 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 WDR82Q6UXN9 313 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 PRR7Q8TB68 274 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 OR2V2Q96R30 315 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 TRAV5A0A0B4J249 113 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 TAS2R45P59539 299 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 LEAP2Q969E1 77 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 ST20Q9HBF5 79 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 DUSP13Q9UII6 198 aa16.66■□□□□ 0.26
RUNX3-202ENST00000338888 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
RUNX3-202ENST00000338888 CD24P25063 80 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 UTF1Q5T230 341 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 DEFB125Q8N687 156 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 CD177Q8N6Q3 437 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 KLF14Q8TD94 323 aaPredicted RBP16.65■□□□□ 0.26
RUNX3-202ENST00000338888 CORTO00230 105 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 MORN5Q5VZ52 161 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 GRAMD2BQ96HH9 432 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 TTTY12Q9BZ98 90 aa16.65■□□□□ 0.26
RUNX3-202ENST00000338888 HIGD1CA8MV81 97 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 FOXA3P55318 350 aaPredicted RBP16.64■□□□□ 0.25
RUNX3-202ENST00000338888 FAM120AOSQ5T036 256 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 SLC25A34Q6PIV7 304 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 VHLLQ6RSH7 139 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 FAM90A1Q86YD7 464 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 VWC2LB2RUY7 222 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 C8orf88P0DMB2 117 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 ZPBPQ9BS86 351 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 SLC25A33Q9BSK2 321 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 IFI27L2Q9H2X8 130 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 TMEM14BQ9NUH8 114 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 FZR1Q9UM11 496 aa16.64■□□□□ 0.25
RUNX3-202ENST00000338888 OR2J3O76001 311 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 BPIFB3P59826 476 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 RPS20P60866 119 aaKnown RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 UBE2L3P68036 154 aaKnown RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 TMEM251Q8N6I4 163 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 OR4S2Q8NH73 311 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 OR9G1Q8NH87 305 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 MCRIP2Q9BUT9 160 aaKnown RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 CSTL1Q9H114 145 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 AMMECR1Q9Y4X0 333 aaPredicted RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 SYS1-DBNDD2H3BUS1 97 aa16.63■□□□□ 0.25
RUNX3-202ENST00000338888 FOXA2Q9Y261 457 aaPredicted RBP16.63■□□□□ 0.25
RUNX3-202ENST00000338888 TOX4O94842 621 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 PSG9Q00887 426 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 ZC2HC1AQ96GY0 325 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 JPT1Q9UK76 154 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 J3QW42 95 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 SMIM21Q3B7S5 101 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 ZNF841Q6ZN19 808 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 DDB2Q92466 427 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 CXXC4Q9H2H0 198 aa16.62■□□□□ 0.25
RUNX3-202ENST00000338888 IDI2-AS1Q9NZ38 188 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms