RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 RND2P52198 227 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 LGALS4P56470 323 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 ZNF114Q8NC26 417 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 OCC1Q8TAD7 63 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 BORCS7Q96B45 105 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
HPS4-201ENST00000336873 NCKAP5O14513 1909 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 IL6RP08887 468 aaPredicted RBP6.81□□□□□ -1.32
HPS4-201ENST00000336873 LRRC10Q5BKY1 277 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 UNQ6494/PRO21346Q6UXR6 183 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 MDS2Q8NDY4 140 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 OR1L4Q8NGR5 311 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 STARD4Q96DR4 205 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 SSBP4Q9BWG4 385 aaPredicted RBP6.81□□□□□ -1.32
HPS4-201ENST00000336873 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 NCOR1P1Q9H4R4 102 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 GNB4Q9HAV0 340 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 MTORP42345 2549 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 ELOA3CA0A087WX78 387 aaPredicted RBP6.81□□□□□ -1.32
HPS4-201ENST00000336873 IQCF6A8MYZ5 107 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 B4DEV8 164 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 C16orf97H3BN30 126 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 ARF6P62330 175 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 ATP6V1FQ16864 119 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 SLC35E4Q6ICL7 350 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 GNG5P63218 68 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 PAX5Q02548 391 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 ZNF146Q15072 292 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 TREML4Q6UXN2 200 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 LINC00596Q86U02 117 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 RNF138Q8WVD3 245 aa6.81□□□□□ -1.32
HPS4-201ENST00000336873 HIVEP2P31629 2446 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 CGB1A6NKQ9 187 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 IL3RAP26951 378 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 HSPE1P61604 102 aaKnown RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 DIAPH2-AS1Q14236 149 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 PRR30Q53SZ7 412 aaPredicted RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 CT45A1Q5HYN5 189 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 CT45A3Q8NHU0 189 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 FAM222BQ8WU58 562 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 ARL2-SNX15V9GYD0 113 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 IGHV3-49A0A0A0MS15 119 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 RBPJQ06330 500 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 BSPH1Q075Z2 132 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 Q56UQ5 140 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 ZNF474Q6S9Z5 364 aaPredicted RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 RPEQ96AT9 228 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 SFRP2Q96HF1 295 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 MRPL20Q9BYC9 149 aaKnown RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 SEBOXQ9HB31 216 aaPredicted RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 INSIG2Q9Y5U4 225 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 EXPH5Q8NEV8 1989 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 M0QZK8 103 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 GGCTO75223 188 aaKnown RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 CXorf1O96002 111 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 FOLR2P14207 255 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 TIMP3P35625 211 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 TAS2R45P59539 299 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 CYP2G1PQ6ZSU1 146 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 MUC15Q8N387 334 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 WDR31Q8NA23 367 aa6.8□□□□□ -1.32
HPS4-201ENST00000336873 MCRIP2Q9BUT9 160 aaKnown RBP6.8□□□□□ -1.32
HPS4-201ENST00000336873 PPIAL4EA0A075B759 164 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PPIAL4DF5H284 164 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PPIAL4FP0DN26 164 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 GCHFRP30047 84 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 ZNF596Q8TC21 504 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 NUDT11Q96G61 164 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 MRPL18Q9H0U6 180 aaKnown RBP6.79□□□□□ -1.32
HPS4-201ENST00000336873 HSPB7Q9UBY9 170 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PPIAL4AQ9Y536 164 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 IGHV3OR16-10A0A075B7F0 116 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PGPA6NDG6 321 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 C15orf62A8K5M9 175 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 FRMD6-AS1P0C7T7 363 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 SRIP30626 198 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 RAB7AP51149 207 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 IQCJQ1A5X6 159 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 ODF3L1Q8IXM7 274 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 ST6GALNAC6Q969X2 333 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PMCHL2Q9BQD1 86 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 VAMP8Q9BV40 100 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 PARD6GQ9BYG4 376 aaPredicted RBP6.79□□□□□ -1.32
HPS4-201ENST00000336873 TNFRSF19Q9NS68 423 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 ASH1LQ9NR48 2969 aaKnown RBP6.79□□□□□ -1.32
HPS4-201ENST00000336873 DSCAML1Q8TD84 2053 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 AHRRA9YTQ3 701 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 AMBPP02760 352 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 SAA1P0DJI8 122 aaPredicted RBP6.79□□□□□ -1.32
HPS4-201ENST00000336873 TDGF1P13385 188 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 CD40P25942 277 aa6.79□□□□□ -1.32
HPS4-201ENST00000336873 RPL8P62917 257 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms