RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GPX1P07203 203 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 AREGP15514 252 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 S100A7P31151 101 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 GPR6P46095 362 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 FAM90A1Q86YD7 464 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 PKDREJQ9NTG1 2253 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 SLC25A17O43808 307 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 HBBP68871 147 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 TRIP6Q15654 476 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 CD177Q8N6Q3 437 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 H3BTX0 84 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 UPK2O00526 184 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 CDKN1AP38936 164 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 ST6GALNAC3Q8NDV1 305 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 RPEQ96AT9 228 aa10.54□□□□□ -0.72
DNMT3A-202ENST00000321117 CHD3Q12873 2000 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 TRGV8A0A0C4DH27 118 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 WNT2P09544 360 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 RPL27AP46776 148 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 CX3CL1P78423 397 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 Q6ZWC4 215 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 OSR1Q8TAX0 266 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 LPAR2Q9HBW0 351 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 HIGD1CA8MV81 97 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 LMO1P25800 156 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 LINC00305Q7Z4B0 112 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 OR4C13Q8NGP0 309 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 POLEQ07864 2286 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 SRRM5B3KS81 715 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 REG1AP05451 166 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 LINC00614P0C842 121 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 GLRXP35754 106 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 TMEM30BQ3MIR4 351 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 RASL11BQ9BPW5 248 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 CDC42EP3Q9UKI2 254 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 HIGD1AQ9Y241 93 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 CRYABP02511 175 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 SELLP14151 372 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 PDLIM4P50479 330 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 ST6GALNAC6Q969X2 333 aa10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-202ENST00000321117 MOSP00540 346 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 COX7A1P24310 79 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 RPL15P61313 204 aaKnown RBP10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 Q0VG73 95 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PRSS8Q16651 343 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 FOXA2Q9Y261 457 aaPredicted RBP10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 BMPR1BO00238 502 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PRRX1P54821 245 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 CD69Q07108 199 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 GTF2H5Q6ZYL4 71 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 ZFP30Q9Y2G7 519 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PPIAL4EA0A075B759 164 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PPIAL4DF5H284 164 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PPIAL4FP0DN26 164 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PYYP10082 97 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 HOXA4Q00056 320 aaPredicted RBP10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 PPIAL4AQ9Y536 164 aa10.52□□□□□ -0.73
DNMT3A-202ENST00000321117 TRAV9-2A0A087WT02 112 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 NPPCP23582 126 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 INSIG2Q9Y5U4 225 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 MC5RP33032 325 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 MYOD1P15172 320 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 FAM222BQ8WU58 562 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 FBXL7Q9UJT9 491 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 LRP4O75096 1905 aa10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 INTS1Q8N201 2190 aaKnown RBP10.51□□□□□ -0.73
DNMT3A-202ENST00000321117 CORTO00230 105 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 LCN12Q6JVE5 192 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 ZNF295-AS1Q8N0V1 137 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 ARL6IP6Q8N6S5 226 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 FDCSPQ8NFU4 85 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 TRAV5A0A0B4J249 113 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 K7ERU9 68 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 NUDT3O95989 172 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 HIF1ANQ9NWT6 349 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 MED12LQ86YW9 2145 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 ZNF318Q5VUA4 2279 aa10.5□□□□□ -0.73
DNMT3A-202ENST00000321117 WNK2Q9Y3S1 2297 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms