RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 Q6P435 159 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 SPACA3Q8IXA5 215 aa13.57□□□□□ -0.24
BRD3-201ENST00000303407 CFPP27918 469 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 SRSF4Q08170 494 aaKnown RBP13.56□□□□□ -0.24
BRD3-201ENST00000303407 TCF23Q7RTU1 214 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 SLC25A15Q9Y619 301 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 KNTC1P50748 2209 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 SELLP14151 372 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 TAS2R60P59551 318 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 ANAPC1Q9H1A4 1944 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 EFNB3Q15768 340 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 TBL2Q9Y4P3 447 aaKnown RBP13.56□□□□□ -0.24
BRD3-201ENST00000303407 CLEC19AQ6UXS0 136 aa13.56□□□□□ -0.24
BRD3-201ENST00000303407 IGHV3OR16-8A0A075B7F1 116 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 TCRBV4S1A1TA0A5B7 111 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 IGKV1-5P01602 117 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 AREGP15514 252 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 SRSF6Q13247 344 aaKnown RBP13.55□□□□□ -0.24
BRD3-201ENST00000303407 VOPP1Q96AW1 172 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 WDR83OSQ9Y284 106 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 IGHV3OR16-12A0A075B7B8 117 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 OTORQ9NRC9 128 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 TRBV6-6A0A0A6YYG2 114 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 DPRXA6NFQ7 191 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 ADMP35318 185 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 C12orf54Q6X4T0 127 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 H3BVH4 76 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 PYYP10082 97 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 OR10W1Q8NGF6 305 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
BRD3-201ENST00000303407 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 CD69Q07108 199 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 FAM168AQ92567 244 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 C7orf71A4D174 169 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 REC114Q7Z4M0 266 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 ZNF524Q96C55 264 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 KLK15Q9H2R5 256 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 TREML4Q6UXN2 200 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 VKORC1Q9BQB6 163 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 CD24P25063 80 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 U3KQA8 63 aa13.54□□□□□ -0.24
BRD3-201ENST00000303407 MUC21A0A0G2JKD1 596 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 MUC21A0A140T8X8 626 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 MUC21Q5SSG8 566 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 CENPVQ7Z7K6 275 aaPredicted RBP13.53□□□□□ -0.24
BRD3-201ENST00000303407 LOC102724200A0A096LPH7 203 aaPredicted RBP13.53□□□□□ -0.24
BRD3-201ENST00000303407 PGPEP1LA6NFU8 196 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 SNRPD3P62318 126 aaKnown RBP13.53□□□□□ -0.24
BRD3-201ENST00000303407 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 DMRTA2Q96SC8 542 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 TMEM70Q9BUB7 260 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 THBDP07204 575 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 LYL1P12980 280 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 HERPUD1Q15011 391 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 SOX21Q9Y651 276 aaPredicted RBP13.53□□□□□ -0.24
BRD3-201ENST00000303407 ASCL4Q6XD76 172 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 TMEM200BQ69YZ2 307 aa13.53□□□□□ -0.24
BRD3-201ENST00000303407 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
BRD3-201ENST00000303407 A0A1B0GW64 132 aa13.52□□□□□ -0.24
BRD3-201ENST00000303407 IGKV3-20P01619 116 aa13.52□□□□□ -0.24
BRD3-201ENST00000303407 TSPOP30536 169 aa13.52□□□□□ -0.24
BRD3-201ENST00000303407 DDB2Q92466 427 aa13.52□□□□□ -0.24
BRD3-201ENST00000303407 RPUSD1Q9UJJ7 312 aaKnown RBP13.52□□□□□ -0.24
BRD3-201ENST00000303407 A0A1B0GUT8 65 aa13.52□□□□□ -0.25
BRD3-201ENST00000303407 ZNF324O75467 553 aaPredicted RBP13.52□□□□□ -0.25
BRD3-201ENST00000303407 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
BRD3-201ENST00000303407 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
BRD3-201ENST00000303407 HEPN1Q6WQI6 88 aa13.52□□□□□ -0.25
BRD3-201ENST00000303407 ETV2O00321 342 aaPredicted RBP13.52□□□□□ -0.25
BRD3-201ENST00000303407 FAM159AQ6UWV7 190 aa13.52□□□□□ -0.25
BRD3-201ENST00000303407 ZNF56Q15929 161 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 Q6ZS49 121 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 C20orf204Q6ZNR8 217 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 C1QL4Q86Z23 238 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 OCC1Q8TAD7 63 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 FREM3P0C091 2139 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 TRAV3A0A0B4J244 114 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 A0A1B0GV90 55 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 NPIPB6E9PJ23 425 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 UBE2L6O14933 153 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 RAB37Q96AX2 223 aa13.51□□□□□ -0.25
BRD3-201ENST00000303407 TIMM23O14925 209 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 MLNRO43193 412 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 GCSHP23434 173 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 SMAGPQ0VAQ4 97 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 RRN3P1Q2M238 152 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
BRD3-201ENST00000303407 COQ2Q96H96 371 aa13.5□□□□□ -0.25
BRD3-201ENST00000303407 GGTLC1Q9BX51 225 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms