RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 IZUMO1RA6ND01 250 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 AREGP15514 252 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 AMMECR1LQ6DCA0 310 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 CD177Q8N6Q3 437 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 RND1Q92730 232 aa12.05□□□□□ -0.48
COL6A2-201ENST00000300527 LSM4Q9Y4Z0 139 aaKnown RBP12.05□□□□□ -0.48
COL6A2-201ENST00000300527 IGHV2-26A0A0B4J1V2 119 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 HOXC12P31275 282 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 MORN2Q502X0 79 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 TNFRSF19Q9NS68 423 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 MUC21A0A0G2JKD1 596 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 MUC21A0A140T8X8 626 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 ZNF891A8MT65 544 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-201ENST00000300527 J3QR06 171 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 LINC00869P0C866 280 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 MEOX1P50221 254 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 TMEM249Q2WGJ8 235 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
COL6A2-201ENST00000300527 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
COL6A2-201ENST00000300527 TNRC6AQ8NDV7 1962 aaKnown RBP12.04□□□□□ -0.48
COL6A2-201ENST00000300527 HIGD1CA8MV81 97 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 NUP35Q8NFH5 326 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 ABI3Q9P2A4 366 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 IGHV1-69-2A0A0G2JMI3 117 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 ISLRO14498 428 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 APOA2P02652 100 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 TAS2R45P59539 299 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 HSPE1P61604 102 aaKnown RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 ZNF766Q5HY98 468 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 C1orf229Q6ZS94 237 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 ZNF503Q96F45 646 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 NAA38Q9BRA0 125 aaKnown RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 IGLC7A0M8Q6 106 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 C11orf53Q8IXP5 236 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 OR10W1Q8NGF6 305 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 OR8B3Q8NGG8 313 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-201ENST00000300527 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
COL6A2-201ENST00000300527 TET2Q6N021 2002 aaPredicted RBP12.02□□□□□ -0.48
COL6A2-201ENST00000300527 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 PRSS47A8MTI9 375 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 HSBP1L1C9JCN9 74 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 ITGB1BP1O14713 200 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 ADH4P08319 380 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 CDKN1BP46527 198 aa12.02□□□□□ -0.48
COL6A2-201ENST00000300527 CYC1P08574 325 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 UQCRFS1P47985 274 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 CHODLQ9H9P2 273 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 A0A087X0K7 114 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 IGLV2-8P01709 118 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 GABRA6Q16445 453 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 NUDT10Q8NFP7 164 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 NUDT11Q96G61 164 aa12.02□□□□□ -0.49
COL6A2-201ENST00000300527 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 K7ESF4 209 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 CEP192Q8TEP8 1941 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PPOXP50336 477 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 SSPNQ14714 243 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 SMIM27A0A1W2PRY6 76 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 C15orf65H3BRN8 121 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 C8orf88P0DMB2 117 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 IGHV1-2P23083 117 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 RIPPLY3P57055 190 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PRR20EP86478 221 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PRR20CP86479 221 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PRR20DP86480 221 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PRR20BP86481 221 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 PRR20AP86496 221 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 LY96Q9Y6Y9 160 aa12.01□□□□□ -0.49
COL6A2-201ENST00000300527 COX7A2P2O60397 106 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 TOMM40O96008 361 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 APELAP0DMC3 54 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 TBR1Q16650 682 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 COX19Q49B96 90 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 OR4F17Q8NGA8 305 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 CST9LQ9H4G1 147 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 IQCF6A8MYZ5 107 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 SP1P08047 785 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 SAA2P0DJI9 122 aaPredicted RBP12□□□□□ -0.49
COL6A2-201ENST00000300527 BPIFB3P59826 476 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 WDR31Q8NA23 367 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 CORO2AQ92828 525 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 IFI27L2Q9H2X8 130 aa12□□□□□ -0.49
COL6A2-201ENST00000300527 YLPM1P49750 1951 aaKnown RBP11.99□□□□□ -0.49
COL6A2-201ENST00000300527 KLF13Q9Y2Y9 288 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms