RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 IZUMO1RA6ND01 250 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 LRRC30A6NM36 301 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 LEPROTL1O95214 131 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 HBZP02008 142 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 COX8AP10176 69 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 CRYGSP22914 178 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 Q6ZR03 302 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 TEX45Q8NA69 505 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 TMEM54Q969K7 222 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 TMEM191AQ9H0A3 160 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 OSTCQ9NRP0 149 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 RABAC1Q9UI14 185 aa12.94□□□□□ -0.34
CTDSP1-201ENST00000273062 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 GPM6AP51674 278 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 COX19Q49B96 90 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 FAM53AQ6NSI3 398 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 GGNQ86UU5 652 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 PLPPR2Q96GM1 343 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 C18orf15Q96N68 181 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 MGST2Q99735 147 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 KNTC1P50748 2209 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 PET117Q6UWS5 81 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 LRRC29Q8WV35 223 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 HES7Q9BYE0 225 aa12.93□□□□□ -0.34
CTDSP1-201ENST00000273062 TLX3O43711 291 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 FTH1P19P0C7X4 201 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 CD59P13987 128 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 REG1BP48304 166 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 ZNF138P52744 262 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 TCTEX1D4Q5JR98 221 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 ADAMTSL5Q6ZMM2 481 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 LIN7CQ9NUP9 197 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 LOC400499M0QZD8 3231 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 VWC2LB2RUY7 222 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 C21orf140B9A014 251 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 CDX4O14627 284 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 KLK10O43240 276 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 CXCL13O43927 109 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 RBMXL2O75526 392 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 FKBP2P26885 142 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 LINC00205P59089 165 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 RAC3P60763 192 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 DRAM1Q8N682 238 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 NANOS1Q8WY41 292 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 ZNF355PQ9NSJ1 428 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 A0A1W2PRE2 83 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 DHHO43323 396 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 FGF6P10767 208 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 C10orf128Q5T292 105 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 PRAMEF5Q5TYX0 476 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 PRAMEF6Q5VXH4 476 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 TREML4Q6UXN2 200 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 SPSB4Q96A44 273 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 GGTLC1Q9BX51 225 aa12.92□□□□□ -0.34
CTDSP1-201ENST00000273062 ZFHX4Q86UP3 3567 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 hCG_38984A0A1B0GV85 526 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 RPL30P62888 115 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 TM4SF20Q53R12 229 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 SPRY4Q9C004 299 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 H1FXQ92522 213 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-201ENST00000273062 SPENQ96T58 3664 aaKnown RBP12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 A6NDN8 102 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 SYNGR3O43761 229 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 P0C879 139 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 CYB561P49447 251 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 INSL3P51460 131 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 LTC4SQ16873 150 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 CEACAM16Q2WEN9 425 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 TIGITQ495A1 244 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 OR10D3Q8NH80 312 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 LINC00479Q96M42 142 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 FER1L6-AS2Q96M78 137 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 MS4A5Q9H3V2 200 aa12.9□□□□□ -0.34
CTDSP1-201ENST00000273062 NCR2O95944 276 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 IGHV3-9P01782 118 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 B4GALT1P15291 398 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 AESQ08117 197 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 WFDC2Q14508 124 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 EFNB3Q15768 340 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 DHRS13Q6UX07 377 aa12.9□□□□□ -0.35
CTDSP1-201ENST00000273062 SH2D6Q7Z4S9 175 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms