RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 TREML4Q6UXN2 200 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 SIAH2O43255 324 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 LEPROTL1O95214 131 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 EFNB3Q15768 340 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 LBHQ53QV2 105 aaPredicted RBP13.84□□□□□ -0.19
PHRF1-201ENST00000264555 EBLN2Q6P2I7 272 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 ZNF474Q6S9Z5 364 aaPredicted RBP13.84□□□□□ -0.19
PHRF1-201ENST00000264555 DMRT1Q9Y5R6 373 aa13.84□□□□□ -0.19
PHRF1-201ENST00000264555 A0A0G2JNJ9 132 aa13.83□□□□□ -0.19
PHRF1-201ENST00000264555 LYNX1G3V0Z9 82 aa13.83□□□□□ -0.19
PHRF1-201ENST00000264555 LYNX1P0DP58 116 aa13.83□□□□□ -0.19
PHRF1-201ENST00000264555 Q9UFV3 132 aa13.83□□□□□ -0.19
PHRF1-201ENST00000264555 TMEM178BH3BS89 294 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 ZFP30Q9Y2G7 519 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 IGKV1D-17A0A075B6S4 117 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 IFITM10A6NMD0 228 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 PET117Q6UWS5 81 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 SNRNP200O75643 2136 aaKnown RBP13.83□□□□□ -0.2
PHRF1-201ENST00000264555 IGHV3-35A0A0C4DH35 117 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 C1QTNF9BB2RNN3 333 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 HTN1P15515 57 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 ANOS1P23352 680 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 IGHV3OR16-10A0A075B7F0 116 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 TCRBV4S1A1TA0A5B7 111 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 TEX29Q8N6K0 151 aa13.83□□□□□ -0.2
PHRF1-201ENST00000264555 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 TMEM200BQ69YZ2 307 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 MBNL3Q9NUK0 354 aaKnown RBP13.82□□□□□ -0.2
PHRF1-201ENST00000264555 GCSAMLQ5JQS6 135 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 IGLV3-1P01715 115 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 RPLP1P05386 114 aaKnown RBP13.82□□□□□ -0.2
PHRF1-201ENST00000264555 THBDP07204 575 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 HOXA5P20719 270 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 GLRX5Q86SX6 157 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 CX3CL1P78423 397 aa13.82□□□□□ -0.2
PHRF1-201ENST00000264555 LINC00473A8K010 186 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 NTF4P34130 210 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 CDKN1AP38936 164 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 RNF138Q8WVD3 245 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 DDTP30046 118 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 S4R3C0 116 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 MPDZO75970 2070 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 HERVK_113P61574 105 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 NEU1Q99519 415 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 RPL13AP40429 203 aaKnown RBP13.81□□□□□ -0.2
PHRF1-201ENST00000264555 TFPI2P48307 235 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 SPATA45Q537H7 98 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 GAFA1Q96PS6 74 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 ACACAQ13085 2346 aa13.81□□□□□ -0.2
PHRF1-201ENST00000264555 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 AUP1Q9Y679 476 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 IGHV3-23P01764 117 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 FAM168AQ92567 244 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 HLA-DRB1P01911 266 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 TRGV3P03979 118 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 FOLR2P14207 255 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 DGAT2L7PQ6IED9 249 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 A0A0G2JRQ6 117 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 PRB3Q04118 309 aaPredicted RBP13.8□□□□□ -0.2
PHRF1-201ENST00000264555 RPP25LQ8N5L8 163 aaKnown RBP13.8□□□□□ -0.2
PHRF1-201ENST00000264555 Q9H3A6 140 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 Q1RN00 199 aa13.8□□□□□ -0.2
PHRF1-201ENST00000264555 C1QTNF9P0C862 333 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
PHRF1-201ENST00000264555 GPR82Q96P67 336 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 LMO1P25800 156 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 OR10W1Q8NGF6 305 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 MAP1LC3AQ9H492 121 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 Q6ZRM9 215 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 DTX1Q86Y01 620 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 SOX21Q9Y651 276 aaPredicted RBP13.79□□□□□ -0.2
PHRF1-201ENST00000264555 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
PHRF1-201ENST00000264555 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 RPP21Q9H633 154 aaKnown RBP13.79□□□□□ -0.2
PHRF1-201ENST00000264555 CHODLQ9H9P2 273 aa13.79□□□□□ -0.2
PHRF1-201ENST00000264555 COLCA2A8K830 154 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 OTORQ9NRC9 128 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 IGHV2-26A0A0B4J1V2 119 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 TIMM23O14925 209 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 SLC25A48Q6ZT89 311 aaKnown RBP13.78□□□□□ -0.2
PHRF1-201ENST00000264555 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 ELOVL1Q9BW60 279 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 ZNF585BQ52M93 769 aa13.78□□□□□ -0.2
PHRF1-201ENST00000264555 PARD6GQ9BYG4 376 aaPredicted RBP13.78□□□□□ -0.2
PHRF1-201ENST00000264555 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 FOXI3A8MTJ6 420 aaPredicted RBP13.77□□□□□ -0.2
PHRF1-201ENST00000264555 GPR183P32249 361 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 RFNGQ9Y644 331 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 IZUMO1RA6ND01 250 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 A6NDN8 102 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms