RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ASPHD1Q5U4P2 390 aa18.1■□□□□ 0.49
SMARCB1-201ENST00000263121 AKAP9Q99996 3911 aa18.1■□□□□ 0.49
SMARCB1-201ENST00000263121 EGR2P11161 476 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 MLANAQ16655 118 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 SLC16A13Q7RTY0 426 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 FNDC4Q9H6D8 234 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 DMRT1Q9Y5R6 373 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 ABCA1O95477 2261 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 AMY1AP04745 511 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 CRYGCP07315 174 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 FHITP49789 147 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 BLOC1S1P78537 153 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 KRTAP1-1Q07627 177 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 GAMTQ14353 236 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 Q6ZRG5 221 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 MGST2Q99735 147 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 PARP11Q9NR21 331 aa18.09■□□□□ 0.49
SMARCB1-201ENST00000263121 ZNF469Q96JG9 3925 aaPredicted RBP18.08■□□□□ 0.49
SMARCB1-201ENST00000263121 NPIPB5A8MRT5 1133 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 CORTO00230 105 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 PRH1P02810 166 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 AKR1C1Q04828 323 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 LY6EQ16553 131 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 AKR1C8PQ5T2L2 129 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 PXDC1Q5TGL8 231 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 TMEM144Q7Z5S9 345 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 C22orf15Q8WYQ4 148 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 WNT10AQ9GZT5 417 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 PITPNC1Q9UKF7 332 aa18.08■□□□□ 0.48
SMARCB1-201ENST00000263121 C17orf112F2Z3M2 114 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 OPRK1P41145 380 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 CAMLGP49069 296 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 TEPPQ6URK8 271 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 COMMD7Q86VX2 200 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 ZNF709Q8N972 641 aa18.07■□□□□ 0.48
SMARCB1-201ENST00000263121 DPPA3Q6W0C5 159 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 TTC9CQ8N5M4 171 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 MISP3Q96FF7 219 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 SLC35E1Q96K37 410 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 GGTLC1Q9BX51 225 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 CCDC168Q8NDH2 2452 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 ACSM6Q6P461 480 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 C16orf82Q7Z2V1 217 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 OR1L6Q8NGR2 347 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 OR2T6Q8NHC8 308 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 SGMS2Q8NHU3 365 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 FAM213BQ8TBF2 198 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 PFDN2Q9UHV9 154 aa18.06■□□□□ 0.48
SMARCB1-201ENST00000263121 SH2D7A6NKC9 451 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 CD5LO43866 347 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 IER3P46695 156 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 ETFRF1Q6IPR1 90 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 TEX29Q8N6K0 151 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 LFNGQ8NES3 379 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 LYPD6BQ8NI32 183 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 VSIRQ9H7M9 311 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 RPRMQ9NS64 109 aa18.05■□□□□ 0.48
SMARCB1-201ENST00000263121 IGKV1OR2-108A0A075B7D4 117 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 M0QZK8 103 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 AGPAT2O15120 278 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 ATP6V0E1O15342 81 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 IGHV4-59P01825 116 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 ELLP55199 621 aaPredicted RBP18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 TMEM41BQ5BJD5 291 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 PRDM13Q9H4Q3 707 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 CSPG4Q6UVK1 2322 aa18.04■□□□□ 0.48
SMARCB1-201ENST00000263121 TEX46H3BTG2 121 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 SOX15O60248 233 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 DEFA4P12838 97 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 ZNF616Q08AN1 781 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 ZNF48Q96MX3 618 aaPredicted RBP18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 MRPL36Q9P0J6 103 aaKnown RBP18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 TSPAN9O75954 239 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 RAB31Q13636 194 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 FFAR4Q5NUL3 377 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 Q6YL49 198 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 OR5R1Q8NH85 324 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 ACY3Q96HD9 319 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 HRH4Q9H3N8 390 aa18.03■□□□□ 0.48
SMARCB1-201ENST00000263121 ZFHX3Q15911 3703 aa18.02■□□□□ 0.48
SMARCB1-201ENST00000263121 MFSD2BA6NFX1 497 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 LINC01548A6NM66 108 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 I3L2K1 104 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 MT-CO2P00403 227 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 FANCD2OSQ96PS1 177 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 KCNIP2Q9NS61 270 aa18.02■□□□□ 0.47
SMARCB1-201ENST00000263121 TEX15Q9BXT5 2789 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 IGLV11-55A0A075B6I3 123 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 IGHV3-48P01763 117 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 MBP02144 154 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 RPL29P47914 159 aaKnown RBP18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 RAB2AP61019 212 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 THAP8Q8NA92 274 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 NPIPB3Q92617 1050 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 TMEM68Q96MH6 324 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 SLC45A2Q9UMX9 530 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 PXMP4Q9Y6I8 212 aa18.01■□□□□ 0.47
SMARCB1-201ENST00000263121 RND2P52198 227 aa18■□□□□ 0.47
SMARCB1-201ENST00000263121 CRIP2P52943 208 aaPredicted RBP18■□□□□ 0.47
SMARCB1-201ENST00000263121 MIC13Q5XKP0 118 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms