RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 AKR1D1P51857 326 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 SNRPEP62304 92 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 GNB1P62873 340 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 ABCA4P78363 2273 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 PSG5Q15238 335 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 TNXAQ16473 311 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 OR51G1Q8NGK1 321 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 OR2T6Q8NHC8 308 aa10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 TECRQ9NZ01 308 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-201ENST00000262554 LOC105371242A0A075B767 164 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 LY6LH3BQJ8 138 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 M0R1W7 72 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 NDUFB4O95168 129 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 C16orf82Q7Z2V1 217 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 RNF5Q99942 180 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 DOK5Q9P104 306 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 METTL1Q9UBP6 276 aaKnown RBP10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.75
SPTLC1-201ENST00000262554 C5orf52A6NGY3 159 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 FOXH1O75593 365 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 CNTFRP26992 372 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 COMPP49747 757 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 TAS2R45P59539 299 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 ARF6P62330 175 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 KIAA0141Q14154 515 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 ETFRF1Q6IPR1 90 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 PPP1R27Q86WC6 154 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 OR11H6Q8NGC7 330 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 ITLN2Q8WWU7 325 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 FAM210BQ96KR6 192 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 RNF2Q99496 336 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 SSX3Q99909 188 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 YTHDF2Q9Y5A9 579 aaKnown RBP10.39□□□□□ -0.75
SPTLC1-201ENST00000262554 IGLC7A0M8Q6 106 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 H7BYZ3 331 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 REG1AP05451 166 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 OR5G3P0C626 314 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 GATA2P23769 480 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 HTR1DP28221 377 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 CEACAM3P40198 252 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 RPL35P42766 123 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 GPR6P46095 362 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 TPTE2P1Q5T6R2 138 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 ZNF114Q8NC26 417 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 OR5B12Q96R08 314 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 MRPL32Q9BYC8 188 aaKnown RBP10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 FNDC4Q9H6D8 234 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 ARL2-SNX15V9GYD0 113 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 NBASA2RRP1 2371 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 TRBV24-1A0A075B6N3 115 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 TGOLN2O43493 480 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 GNLYP22749 145 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 S100PP25815 95 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 UQCRFS1P47985 274 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 NPIPB3Q92617 1050 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 DPM3Q9P2X0 92 aa10.38□□□□□ -0.75
SPTLC1-201ENST00000262554 TPRP12270 2363 aaKnown RBP10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 A0A1W2PPR1 153 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 TCRBV4S1A1TA0A5B7 111 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 UBE2CO00762 179 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 CDKN1AP38936 164 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 LINC00518Q8N0U6 118 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 THAP8Q8NA92 274 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 PFDN5Q99471 154 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 DERL1Q9BUN8 251 aa10.37□□□□□ -0.75
SPTLC1-201ENST00000262554 AP4M1O00189 453 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 CORTO00230 105 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 TIMM23O14925 209 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 OR7C2O60412 319 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 AREGP15514 252 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 PRTN3P24158 256 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 GALR1P47211 349 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 SELENOTP62341 195 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 PLGLAQ15195 96 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 HCP5Q6MZN7 132 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 OR5T1Q8NG75 326 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 OR1L4Q8NGR5 311 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 C22orf15Q8WYQ4 148 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 MISP3Q96FF7 219 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 FBXL15Q9H469 300 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 TMEM8BA6NDV4 472 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 IGHV2-5P01817 119 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 C8orf88P0DMB2 117 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 CD99P14209 185 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 SSBP2P81877 361 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 FABP9Q0Z7S8 132 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 C1orf122Q6ZSJ8 110 aa10.36□□□□□ -0.75
SPTLC1-201ENST00000262554 NECAP1Q8NC96 275 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms