RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 COL10A1Q03692 680 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 PAX8Q06710 450 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 EBI3Q14213 229 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 VWC2Q2TAL6 325 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 C9orf152Q5JTZ5 239 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 OR4C12Q96R67 309 aa4.4□□□□□ -1.7
TOPBP1-201ENST00000260810 B4DEV8 164 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 LIPFP07098 398 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM106CPP0CH98 169 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 PPIFP30405 207 aaKnown RBP4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 CST9LP1Q5W188 147 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF66Q6ZN08 573 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 OR4A5Q8NH83 315 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM104AQ969W3 186 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 GFOD1Q9NXC2 390 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 TRBV23-1A0A0A0MS06 115 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 S1PR2O95136 353 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 PPP1R17O96001 155 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 GRPP07492 148 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 HOXB4P17483 251 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 CENPVL3A0A0U1RRI6 287 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 PDCD6O75340 191 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 LINC00869P0C866 280 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 PNRC1Q12796 327 aaPredicted RBP4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 KHDC3LQ587J8 217 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 SOHLH1Q5JUK2 328 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10G9Q8NGN4 311 aa4.4□□□□□ -1.71
TOPBP1-201ENST00000260810 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 IGLC7A0M8Q6 106 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 H7BYZ3 331 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 J3QKU1 62 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 PGLYRP1O75594 196 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 SELENOTP62341 195 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 RPL8P62917 257 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 MEF2CQ06413 473 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM128Q5BJH2 165 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 GCSAMLQ5JQS6 135 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 VHLLQ6RSH7 139 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10W1Q8NGF6 305 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 OR10V1Q8NGI7 309 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 OR5AN1Q8NGI8 311 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 MARC2Q969Z3 335 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 GPR82Q96P67 336 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 PSENENQ9NZ42 101 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 B9A039 149 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 FAM90A26D6RGX4 464 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 NMBP08949 121 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 H2AFB1P0C5Y9 115 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 CTRB1P17538 263 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 VDAC1P21796 283 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 UCP1P25874 307 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 GALR1P47211 349 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 PSG9Q00887 426 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 BTN1A1Q13410 526 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 KRBOX4Q5JUW0 171 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 Q8WTZ3 238 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 ANAPC16Q96DE5 110 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 RBM14Q96PK6 669 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 ONECUT1Q9UBC0 465 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 DNASE2O00115 360 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 CTSDP07339 412 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 OR4E1P0C645 316 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 OR51H1Q8NH63 302 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 BPESC1Q9GZL8 116 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 TAF9BQ9HBM6 251 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 TECRQ9NZ01 308 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 GYPAP02724 150 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 PKIAP61925 76 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 FOXE3Q13461 319 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 TMEM97Q5BJF2 176 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 PAPPA-AS1Q5QFB9 102 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 RXFP4Q8TDU9 374 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 SMAD5-AS1Q9Y6J3 95 aa4.39□□□□□ -1.71
TOPBP1-201ENST00000260810 TRDCB7Z8K6 153 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 HSD17B6O14756 317 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 C1QBP02746 253 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 USF2Q15853 346 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 Q56UQ5 140 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 C10orf105Q8TEF2 133 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 CCL13Q99616 98 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 RPS10P5Q9NQ39 176 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 ZNF586Q9NXT0 402 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 GNG13Q9P2W3 67 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 GOLT1BQ9Y3E0 138 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 ZFP92A6NM28 416 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 TRBV12-3P01733 135 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 GPR6P46095 362 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 P2RY1P47900 373 aa4.38□□□□□ -1.71
TOPBP1-201ENST00000260810 UCP3P55916 312 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms