RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KLHDC3Q9BQ90 382 aa15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 SSBP4Q9BWG4 385 aaPredicted RBP15.61■□□□□ 0.09
SMARCC1-201ENST00000254480 CD59P13987 128 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 ERASQ7Z444 233 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 TBL2Q9Y4P3 447 aaKnown RBP15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 IGKV1D-8A0A087WSZ0 117 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 IGFBP3P17936 291 aaPredicted RBP15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 EFNB1P98172 346 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 ZNF414Q96IQ9 312 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 NBR2O15453 112 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 NDUFA3O95167 84 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 GPX4P36969 197 aaPredicted RBP15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 TRAV14DV4A0A0A6YYC5 116 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 A0A0G2JLM5 398 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 TMEM219Q86XT9 240 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 OR10W1Q8NGF6 305 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 PMCHL2Q9BQD1 86 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 SCN5AQ14524 2016 aa15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 SPTBN1Q01082 2364 aaKnown RBP15.6■□□□□ 0.09
SMARCC1-201ENST00000254480 MORN2Q502X0 79 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 GTF3AQ92664 365 aaKnown RBP15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 IGLV3-12A0A075B6K2 115 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 PGPEP1LA6NFU8 196 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 C1QTNF9BB2RNN3 333 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 DDTP30046 118 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 DOCK4Q8N1I0 1966 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 KIF26BQ2KJY2 2108 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 A0A0A6YYD4 124 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 C12orf54Q6X4T0 127 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 PAQR4Q8N4S7 273 aaPredicted RBP15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 ZNF525Q8N782 197 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 NCOR1O75376 2440 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 FAM209BQ5JX69 171 aa15.59■□□□□ 0.09
SMARCC1-201ENST00000254480 CA7P43166 264 aa15.58■□□□□ 0.09
SMARCC1-201ENST00000254480 ZFP36L1Q07352 338 aaKnown RBP15.58■□□□□ 0.09
SMARCC1-201ENST00000254480 RNF222A6NCQ9 220 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 EFNA2O43921 213 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 THBDP07204 575 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 VDAC2P45880 294 aaPredicted RBP15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 KLRD1Q13241 179 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 SCGB3A1Q96QR1 104 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 NYNRINQ9P2P1 1898 aaKnown RBP15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 TIMM23O14925 209 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 CD7P09564 240 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 CDX1P47902 265 aaPredicted RBP15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 CTAG1AP78358 180 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 ZNF418Q8TF45 676 aaPredicted RBP15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 TMEM101Q96IK0 257 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 IL36BQ9NZH7 164 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 JKAMPQ9P055 326 aa15.58■□□□□ 0.08
SMARCC1-201ENST00000254480 SRSF3P84103 164 aaKnown RBP15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 MEF2CQ06413 473 aaPredicted RBP15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 ZNF362Q5T0B9 420 aaPredicted RBP15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 TRBV6-7A0A0A0MS04 114 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 SRP19P09132 144 aaKnown RBP15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 OR9G9P0C7N8 305 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 RTN4RL2Q86UN3 420 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 TMEM133Q9H2Q1 129 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 PLSCR2Q9NRY7 297 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 DPRXA6NFQ7 191 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 FAM131CQ96AQ9 280 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 RHOGP84095 191 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 C10orf55Q5SWW7 151 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 LOC102723996A0A087X1L8 192 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 UPK2O00526 184 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 PET117Q6UWS5 81 aa15.57■□□□□ 0.08
SMARCC1-201ENST00000254480 LYPD3O95274 346 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 IGHV1-46P01743 117 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 LDLRAD2Q5SZI1 272 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 SFTA2Q6UW10 78 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 PARD6GQ9BYG4 376 aaPredicted RBP15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 RPP21Q9H633 154 aaKnown RBP15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 ZNF497Q6ZNH5 498 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 HIGD1CA8MV81 97 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 GGACTQ9BVM4 153 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 THADAQ6YHU6 1953 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 A0A1B0GUT8 65 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 OR11H12B2RN74 326 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 FER1L6-AS1Q8NA97 138 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 OR11H1Q8NG94 326 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 OR11H2Q8NH07 326 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 CACNG7P62955 275 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 ATRAIDQ6UW56 229 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 NUDT11Q96G61 164 aa15.56■□□□□ 0.08
SMARCC1-201ENST00000254480 C1QTNF9P0C862 333 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 TMEM250H0YL14 139 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 MLNRO43193 412 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 STHQ8IWL8 128 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 C18orf12Q96KH6 178 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 LCTP09848 1927 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 MST1P26927 711 aa15.55■□□□□ 0.08
SMARCC1-201ENST00000254480 NRN1LQ496H8 165 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 K7ERU9 68 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 MYO7BQ6PIF6 2116 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 LY6HO94772 140 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 RNF126Q9BV68 326 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 TRAV5A0A0B4J249 113 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms