RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 LGI3Q8N145 548 aa13.63□□□□□ -0.23
SNRPA1-201ENST00000254193 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
SNRPA1-201ENST00000254193 CHRDL1Q9BU40 450 aa13.63□□□□□ -0.23
SNRPA1-201ENST00000254193 ENY2Q9NPA8 101 aa13.63□□□□□ -0.23
SNRPA1-201ENST00000254193 IZUMO1RA6ND01 250 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 A6NHS1 94 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 NXPH3O95157 252 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 MT-CO2P00403 227 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 FOLR2P14207 255 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 VAMP1P23763 118 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 RBMS2Q15434 407 aaKnown RBP13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 CACNG8Q8WXS5 425 aa13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 BSCL2Q96G97 398 aaPredicted RBP13.62□□□□□ -0.23
SNRPA1-201ENST00000254193 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 TMEM213A2RRL7 107 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 NAP1L6A6NFF2 107 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 SULT1A3P0DMM9 295 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 SULT1A4P0DMN0 295 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 RNASE2P10153 161 aaKnown RBP13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 ADMP35318 185 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 SRPXP78539 464 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 NMSQ5H8A3 153 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 DYNLRB2Q8TF09 96 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 SELENOKQ9Y6D0 94 aa13.61□□□□□ -0.23
SNRPA1-201ENST00000254193 NDUFB6O95139 128 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 CBLN1P23435 193 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 SUB1P53999 127 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 CD69Q07108 199 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 PPP1R1AQ13522 171 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 DEFB114Q30KQ6 69 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 ANKRD55Q3KP44 614 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 CD300EQ496F6 205 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 PVRIGQ6DKI7 326 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 SPSB3Q6PJ21 355 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 CENPSQ8N2Z9 138 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 ATP6V0BQ99437 205 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 B9D2Q9BPU9 175 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 ZNF436Q9C0F3 470 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 FLVCR2Q9UPI3 526 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 SMAD5-AS1Q9Y6J3 95 aa13.6□□□□□ -0.23
SNRPA1-201ENST00000254193 CEBPZOSA8MTT3 80 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 A8MWP6 167 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 SFT2D2O95562 160 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 CTSGP08311 255 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 BTCP35070 178 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 MFAP4P55083 255 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 LCN12Q6JVE5 192 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 C11orf87Q6NUJ2 197 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 UXS1Q8NBZ7 420 aa13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-201ENST00000254193 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 CENPXA8MT69 81 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 SMCO1Q147U7 214 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 BSXQ3C1V8 233 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 Q8N1Y9 231 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 OR2K2Q8NGT1 345 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 TMEM190Q8WZ59 177 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 TXN2Q99757 166 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 PALMDQ9NP74 551 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 UFC1Q9Y3C8 167 aa13.58□□□□□ -0.24
SNRPA1-201ENST00000254193 PLA2G10O15496 165 aa13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 NUPL2O15504 423 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 MLANAQ16655 118 aa13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 ZNF414Q96IQ9 312 aa13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 C20orf24Q9BUV8 137 aa13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 MLXQ9UH92 298 aa13.57□□□□□ -0.24
SNRPA1-201ENST00000254193 A0A1B0GU03 582 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 ZNF785A8K8V0 405 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 NDUFA4O00483 81 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 HTR2BP41595 481 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 TNFRSF9Q07011 255 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 LRTM2Q8N967 370 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 DUSP18Q8NEJ0 188 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 OR1S1Q8NH92 325 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 ASCL2Q99929 193 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 HSPB7Q9UBY9 170 aa13.56□□□□□ -0.24
SNRPA1-201ENST00000254193 PIGBOS1A0A0B4J2F0 54 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 C9orf170A2RU37 121 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 CORTO00230 105 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 GNG7O60262 68 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 C8orf88P0DMB2 117 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 ANXA7P20073 488 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 OPRK1P41145 380 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 ELLP55199 621 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 GUCA2BQ16661 112 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 BTNL8Q6UX41 500 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 SLC24A4Q8NFF2 622 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms