RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 MTCL1Q9Y4B5 1905 aaKnown RBP11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 LOC107986453A0A1B0GWG9 222 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 C5orf67F2Z3F1 127 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 H3BTX0 84 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 IGHV3-9P01782 118 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 SPINK2P20155 84 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 ZNF137PP52743 207 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 DOK3Q7L591 496 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 OR51H1Q8NH63 302 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 C1QTNF5Q9BXJ0 243 aa11.23□□□□□ -0.61
COLGALT1-201ENST00000252599 K7EMI3 77 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 NPFFO15130 113 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 UFSP1Q6NVU6 142 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 C1orf210Q8IVY1 113 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 ZNF442Q9H7R0 627 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 C19orf25Q9UFG5 118 aaPredicted RBP11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 POLDIP2Q9Y2S7 368 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 SHANK1Q9Y566 2161 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 SCRG1O75711 98 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 ZNF117Q03924 483 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 C9orf40Q8IXQ3 194 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 SIT1Q9Y3P8 196 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 J3QLI3 93 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 SLC25A5P05141 298 aaKnown RBP11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
COLGALT1-201ENST00000252599 TMED7-TICAM2A0A0A6YYA0 188 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 CXorf51AA0A1B0GTR3 108 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 FAM106CPP0CH98 169 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 PDCD1Q15116 288 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 FAM106AQ4KMX7 169 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 TMEM171Q8WVE6 324 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 A0A1W2PRD5 423 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 A0A1W2PRF3 423 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 A0A1W2PRM7 423 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 GAGE2AQ6NT46 116 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 SLC23A3Q6PIS1 610 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 NT5CQ8TCD5 201 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 HIST1H4GQ99525 98 aa11.21□□□□□ -0.61
COLGALT1-201ENST00000252599 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.62
COLGALT1-201ENST00000252599 ZNHIT1O43257 154 aa11.21□□□□□ -0.62
COLGALT1-201ENST00000252599 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.62
COLGALT1-201ENST00000252599 RETNQ9HD89 108 aa11.21□□□□□ -0.62
COLGALT1-201ENST00000252599 ZNF732B4DXR9 585 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 ECI1P42126 302 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 EDDM3BP56851 147 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 ZFP36L1Q07352 338 aaKnown RBP11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 CENPVQ7Z7K6 275 aaPredicted RBP11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 DDB2Q92466 427 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 HDHD3Q9BSH5 251 aaPredicted RBP11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 ABCA4P78363 2273 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 IGHV3-64DA0A0J9YX35 117 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 CTXND1A0A1B0GTU2 59 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 PRR32B1ATL7 298 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 CTLA4P16410 223 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 ATP5G3P48201 142 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 FOXI1Q12951 378 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 DNAJC30Q96LL9 226 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 PATE3B3GLJ2 98 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 CDAP32320 146 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 OSR2Q8N2R0 312 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
COLGALT1-201ENST00000252599 DENND4CQ5VZ89 1909 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 A0A1B0GX78 115 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 IL4P05112 153 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 NTF4P34130 210 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 HERVK_113P61574 105 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 MALLQ13021 153 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 Q6AWC8 147 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 RDH5Q92781 318 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 ZNF407Q9C0G0 2248 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 TINCRA0A1B0GVN0 87 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 F8WDY8 70 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 TGFBR3LH3BV60 316 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 TRBV9A0A0B4J1U6 114 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 IGHV3-15A0A0B4J1V0 119 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 MBD3L4A6NDZ8 208 aaPredicted RBP11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 MBD3L3A6NE82 208 aaPredicted RBP11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 MBD3L5A6NJ08 208 aaPredicted RBP11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 DEFA4P12838 97 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 UCNP55089 124 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 YPEL3P61236 119 aaPredicted RBP11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 GUSBP11Q6P575 273 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 OR4X2Q8NGF9 303 aa11.19□□□□□ -0.62
COLGALT1-201ENST00000252599 SIRPDQ9H106 197 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms