RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 FNDC4Q9H6D8 234 aaPredicted RBP15.66■□□□□ 0.1
SNRPA-201ENST00000243563 PAIP2BQ9ULR5 123 aaKnown RBP15.66■□□□□ 0.1
SNRPA-201ENST00000243563 U3KQ87 197 aa15.66■□□□□ 0.1
SNRPA-201ENST00000243563 MFSD2BA6NFX1 497 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 PRSS46E5RG02 174 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 TSC22D2O75157 780 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 TRGV3P03979 118 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 RAB9AP51151 201 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 CAV2P51636 162 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 TPPP2P59282 170 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 TAS2R30P59541 319 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 SLC35B1P78383 322 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 FOXE3Q13461 319 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 TEX38Q6PEX7 206 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 MRPL41Q8IXM3 137 aaKnown RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 RNF152Q8N8N0 203 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 MYOZ3Q8TDC0 251 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 WFDC12Q8WWY7 111 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 LYRM2Q9NU23 88 aaPredicted RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 MRPL36Q9P0J6 103 aaKnown RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 STRAPQ9Y3F4 350 aaKnown RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 E5RGE8 158 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 K7EIM0 57 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 RPL23AP62750 156 aaKnown RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 FOXL1Q12952 345 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 DCUN1D4Q92564 292 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 PINX1Q96BK5 328 aaKnown RBP15.65■□□□□ 0.1
SNRPA-201ENST00000243563 ZFP57Q9NU63 452 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 FBXL7Q9UJT9 491 aa15.65■□□□□ 0.1
SNRPA-201ENST00000243563 I3L2K1 104 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 BRI3O95415 125 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 IGHV3-23P01764 117 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 RLN2P04090 185 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 TCTE3Q8IZS6 198 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 TMEM252Q8N6L7 170 aa15.64■□□□□ 0.09
SNRPA-201ENST00000243563 FXYD6-FXYD2A0A087WZ82 144 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 H3BUA1 57 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 CST7O76096 145 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 MT-CO2P00403 227 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 ELANEP08246 267 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 PVALBP20472 110 aaPredicted RBP15.63■□□□□ 0.09
SNRPA-201ENST00000243563 OR8G2PQ6IF36 304 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 THAP6Q8TBB0 222 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 GNB4Q9HAV0 340 aa15.63■□□□□ 0.09
SNRPA-201ENST00000243563 IGHV3-11P01762 117 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 OR8U8P0C7N1 319 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 SLC25A4P12235 298 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 P2RY1P47900 373 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 SUB1P53999 127 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNRPA-201ENST00000243563 NHLH2Q02577 135 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 C15orf32Q32M92 178 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 ETV3LQ6ZN32 361 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 ZNF491Q8N8L2 437 aa15.62■□□□□ 0.09
SNRPA-201ENST00000243563 CITED2Q99967 270 aaPredicted RBP15.62■□□□□ 0.09
SNRPA-201ENST00000243563 A0A1B0GUS0 222 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 IFNA4P05014 189 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 PET100P0DJ07 73 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 EWSR1Q01844 656 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNRPA-201ENST00000243563 FGL1Q08830 312 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 NECAP1Q8NC96 275 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 OR4X2Q8NGF9 303 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 OR5B12Q96R08 314 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 F8W735 103 aaPredicted RBP15.61■□□□□ 0.09
SNRPA-201ENST00000243563 HIST1H1BP16401 226 aaKnown RBP15.61■□□□□ 0.09
SNRPA-201ENST00000243563 TMEM65Q6PI78 240 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 COMMD1Q8N668 190 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 SCARB1Q8WTV0 552 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 CCDC140Q96MF4 163 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 MDFIQ99750 246 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 SLA2Q9H6Q3 261 aa15.61■□□□□ 0.09
SNRPA-201ENST00000243563 RNF222A6NCQ9 220 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 ADARB2-AS1A8MUL3 147 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 LY86O95711 162 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 OPRK1P41145 380 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 TMEM217Q8N7C4 229 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 OR1L6Q8NGR2 347 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 RNASEH2CQ8TDP1 164 aaKnown RBP15.6■□□□□ 0.09
SNRPA-201ENST00000243563 TMEM158Q8WZ71 300 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 TNFSF18Q9UNG2 199 aa15.6■□□□□ 0.09
SNRPA-201ENST00000243563 FAM223BA6NKX1 122 aa15.59■□□□□ 0.09
SNRPA-201ENST00000243563 TRBV12-3P01733 135 aa15.59■□□□□ 0.09
SNRPA-201ENST00000243563 RPL12P30050 165 aaKnown RBP15.59■□□□□ 0.09
SNRPA-201ENST00000243563 RAB11AP62491 216 aa15.59■□□□□ 0.09
SNRPA-201ENST00000243563 CD69Q07108 199 aa15.59■□□□□ 0.09
SNRPA-201ENST00000243563 FAM223AQ8IWN6 122 aa15.59■□□□□ 0.09
SNRPA-201ENST00000243563 A0A1W2PRX2 142 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 SULT1A1P50225 295 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 RPP30P78346 268 aaKnown RBP15.58■□□□□ 0.09
SNRPA-201ENST00000243563 ATP5G2Q06055 141 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 EXOSC2Q13868 293 aaKnown RBP15.58■□□□□ 0.09
SNRPA-201ENST00000243563 KHDC1LQ5JSQ8 128 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 ACOT7LQ6ZUV0 252 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 SLC16A13Q7RTY0 426 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 ZNF546Q86UE3 836 aa15.58■□□□□ 0.09
SNRPA-201ENST00000243563 TCRBV4S1A1TA0A5B7 111 aa15.57■□□□□ 0.08
SNRPA-201ENST00000243563 ATP5IP56385 69 aaPredicted RBP15.57■□□□□ 0.08
SNRPA-201ENST00000243563 ZNF502Q8TBZ5 544 aa15.57■□□□□ 0.08
SNRPA-201ENST00000243563 CORTO00230 105 aa15.57■□□□□ 0.08
SNRPA-201ENST00000243563 ARPC5O15511 151 aa15.57■□□□□ 0.08
SNRPA-201ENST00000243563 C1QBP02746 253 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms