RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 YTHDF2Q9Y5A9 579 aaKnown RBP16.39■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF503-AS2A6NEH8 195 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 PMS2P5A8MQ11 134 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 RRHO14718 337 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 FXYD3Q14802 87 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 Q8N7P7 452 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 SNRNP40Q96DI7 357 aaKnown RBP16.39■□□□□ 0.21
HOXC13-201ENST00000243056 BORCS8Q96FH0 119 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 FOXB1Q99853 325 aa16.39■□□□□ 0.21
HOXC13-201ENST00000243056 C9orf118A6NHY6 69 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 H3BUT2 72 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 HLA-DRB1P01911 266 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 ARL14EPLP0DKL9 152 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 RPL31P62899 125 aaKnown RBP16.38■□□□□ 0.21
HOXC13-201ENST00000243056 RNASEKQ6P5S7 137 aaKnown RBP16.38■□□□□ 0.21
HOXC13-201ENST00000243056 Q6ZS49 121 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 SEM1Q6ZVN7 128 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 OR2Z1Q8NG97 314 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 GPR183P32249 361 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 UQCRFS1P47985 274 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 MEF2CQ06413 473 aaPredicted RBP16.38■□□□□ 0.21
HOXC13-201ENST00000243056 LY6DQ14210 128 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 FAM120AOSQ5T036 256 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 OR2D2Q9H210 308 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 TNFRSF19Q9NS68 423 aa16.38■□□□□ 0.21
HOXC13-201ENST00000243056 TEX48A0A1B0GUV7 120 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 HSD52Q0P140 79 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 SLC35E4Q6ICL7 350 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 CCDC144NLQ6NUI1 221 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 C2orf91Q6ZV80 131 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 C10orf35Q96D05 121 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 RNASE7Q9H1E1 156 aaKnown RBP16.37■□□□□ 0.21
HOXC13-201ENST00000243056 SH2D7A6NKC9 451 aaPredicted RBP16.37■□□□□ 0.21
HOXC13-201ENST00000243056 SRSF7Q16629 238 aaKnown RBP eCLIP16.37■□□□□ 0.21
HOXC13-201ENST00000243056 LINC00173Q6ZV60 143 aa16.37■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF32P17041 273 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF718Q3SXZ3 478 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 STPG3Q8N7X2 389 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 PERPQ96FX8 193 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 PLEK2Q9NYT0 353 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.36■□□□□ 0.21
HOXC13-201ENST00000243056 CCL2P13500 99 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 CACNA1BQ00975 2339 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 COX19Q49B96 90 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 OR2K2Q8NGT1 345 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 OR2T6Q8NHC8 308 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 POM121L2Q96KW2 1035 aa16.36■□□□□ 0.21
HOXC13-201ENST00000243056 C9JCJ5 164 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 PCSK4Q6UW60 755 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 RAB1CQ92928 201 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 FAM215AQ9Y5M1 114 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 TSSC4Q9Y5U2 329 aaPredicted RBP16.35■□□□□ 0.21
HOXC13-201ENST00000243056 USP24Q9UPU5 2620 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 M0R135 149 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 F2RL2O00254 374 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 COL8A2P25067 703 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 UCNP55089 124 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF585BQ52M93 769 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 FAM27BQ5VT28 67 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF788Q6ZQV5 615 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 LHFPL2Q6ZUX7 228 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 ZNF799Q96GE5 643 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 AP1S3Q96PC3 154 aa16.35■□□□□ 0.21
HOXC13-201ENST00000243056 HSPB6O14558 160 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 CRXO43186 299 aaPredicted RBP16.34■□□□□ 0.21
HOXC13-201ENST00000243056 USF1P22415 310 aaPredicted RBP16.34■□□□□ 0.21
HOXC13-201ENST00000243056 KIR2DL2P43627 348 aaPredicted RBP16.34■□□□□ 0.21
HOXC13-201ENST00000243056 EDDM3BP56851 147 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 RPL24P83731 157 aaKnown RBP16.34■□□□□ 0.21
HOXC13-201ENST00000243056 DOLPP1Q86YN1 238 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 TXNDC17Q9BRA2 123 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 JKAMPQ9P055 326 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 EPG5Q9HCE0 2579 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 CFAP46Q8IYW2 2715 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 A0A1W2PPV4 95 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 LYZL6O75951 148 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 OR10J4P0C629 311 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 HTR1DP28221 377 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 SEC11AP67812 179 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 URB1-AS1Q96HZ7 61 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 OR2V2Q96R30 315 aa16.34■□□□□ 0.21
HOXC13-201ENST00000243056 FOXL2NBQ6ZUU3 175 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 OR10AG1Q8NH19 301 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 SSBP4Q9BWG4 385 aaPredicted RBP16.33■□□□□ 0.2
HOXC13-201ENST00000243056 IGSF10Q6WRI0 2623 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 GAGE12HA6NDE8 117 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 H3BRM9 83 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 SYS1-DBNDD2H3BUS1 97 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 SNAI2O43623 268 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 ZNF16P17020 682 aaPredicted RBP16.33■□□□□ 0.2
HOXC13-201ENST00000243056 RPL8P62917 257 aaKnown RBP16.33■□□□□ 0.2
HOXC13-201ENST00000243056 VWC2Q2TAL6 325 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 FAM214BQ7L5A3 538 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 LY96Q9Y6Y9 160 aa16.33■□□□□ 0.2
HOXC13-201ENST00000243056 TRGV10A0A0A0MS01 117 aa16.32■□□□□ 0.2
HOXC13-201ENST00000243056 PSMB11A5LHX3 300 aa16.32■□□□□ 0.2
HOXC13-201ENST00000243056 IGLV2-14P01704 120 aa16.32■□□□□ 0.2
HOXC13-201ENST00000243056 CD1BP29016 333 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms