RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 MINOS1Q5TGZ0 78 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 CFHR4Q92496 578 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 SRSF8Q9BRL6 282 aaKnown RBP18.64■□□□□ 0.57
MSX2-201ENST00000239243 FBXL15Q9H469 300 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 SEPSECSQ9HD40 501 aaKnown RBP18.64■□□□□ 0.57
MSX2-201ENST00000239243 HILPDAQ9Y5L2 63 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 MINOS1-NBL1R4GNA1 71 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 GNB1P62873 340 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 FLI1Q01543 452 aaPredicted RBP18.64■□□□□ 0.57
MSX2-201ENST00000239243 CYP2G1PQ6ZSU1 146 aa18.64■□□□□ 0.57
MSX2-201ENST00000239243 CXorf65A6NEN9 183 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 TSPAN9O75954 239 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 FOLR2P14207 255 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 RNF212Q495C1 297 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 FAM78BQ5VT40 261 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 OR2T6Q8NHC8 308 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 HIST1H2BAQ96A08 127 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 ISOC2Q96AB3 205 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 BPESC1Q9GZL8 116 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 FUT9Q9Y231 359 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 PRELID1Q9Y255 219 aa18.63■□□□□ 0.57
MSX2-201ENST00000239243 IGHV2-70DA0A0C4DH43 119 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 MOSP00540 346 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 MMDQ15546 238 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 OR1P1Q8NH06 330 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 FNDC4Q9H6D8 234 aaPredicted RBP18.62■□□□□ 0.57
MSX2-201ENST00000239243 ACACBO00763 2458 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 F6UZH7 168 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 CLN5O75503 358 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 REG1AP05451 166 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 PDLIM4P50479 330 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 LGALS4P56470 323 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 LCN2P80188 198 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 PAX2Q02962 417 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 TMEM241Q24JQ0 296 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 LHFPL4Q7Z7J7 247 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 C22orf15Q8WYQ4 148 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 RPUSD4Q96CM3 377 aaKnown RBP18.62■□□□□ 0.57
MSX2-201ENST00000239243 RNF2Q99496 336 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 SIRPDQ9H106 197 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 PARLQ9H300 379 aa18.62■□□□□ 0.57
MSX2-201ENST00000239243 DCHS2Q6V1P9 2916 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 NBR2O15453 112 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 GCHFRP30047 84 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 CST9LP1Q5W188 147 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 THAP8Q8NA92 274 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 NPBQ8NG41 125 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 SRSF12Q8WXF0 261 aaKnown RBP18.61■□□□□ 0.57
MSX2-201ENST00000239243 CRYBA1P05813 215 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 HOXB4P17483 251 aaPredicted RBP18.61■□□□□ 0.57
MSX2-201ENST00000239243 SELENOTP62341 195 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 ZNF674Q2M3X9 581 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 TMEM242Q9NWH2 141 aa18.61■□□□□ 0.57
MSX2-201ENST00000239243 TAS2R45P59539 299 aa18.6■□□□□ 0.57
MSX2-201ENST00000239243 UBE2G2P60604 165 aa18.6■□□□□ 0.57
MSX2-201ENST00000239243 LMO4P61968 165 aa18.6■□□□□ 0.57
MSX2-201ENST00000239243 IGFBPL1Q8WX77 278 aa18.6■□□□□ 0.57
MSX2-201ENST00000239243 TECRQ9NZ01 308 aaKnown RBP18.6■□□□□ 0.57
MSX2-201ENST00000239243 TEX22C9J3V5 150 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 FOXH1O75593 365 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 NDUFA3O95167 84 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 OR5G3P0C626 314 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 AREGP15514 252 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 SPATA31B1PQ5VZV4 182 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 OR2T10Q8NGZ9 312 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 NPIPB3Q92617 1050 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 MRPL32Q9BYC8 188 aaKnown RBP18.59■□□□□ 0.57
MSX2-201ENST00000239243 F11RQ9Y624 299 aaKnown RBP18.59■□□□□ 0.57
MSX2-201ENST00000239243 ARL2-SNX15V9GYD0 113 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 ARHGAP32A7KAX9 2087 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 TCRBV4S1A1TA0A5B7 111 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 IGHV4-39P01824 125 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 CRYGCP07315 174 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 FAM24BQ8N5W8 94 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 MISP3Q96FF7 219 aa18.59■□□□□ 0.57
MSX2-201ENST00000239243 TBL2Q9Y4P3 447 aaKnown RBP18.59■□□□□ 0.57
MSX2-201ENST00000239243 KLF2Q9Y5W3 355 aaPredicted RBP18.59■□□□□ 0.57
MSX2-201ENST00000239243 TOX4O94842 621 aa18.58■□□□□ 0.57
MSX2-201ENST00000239243 SSX2Q16385 188 aa18.58■□□□□ 0.57
MSX2-201ENST00000239243 PQLC2Q6ZP29 291 aa18.58■□□□□ 0.57
MSX2-201ENST00000239243 EAF1Q96JC9 268 aaPredicted RBP18.58■□□□□ 0.57
MSX2-201ENST00000239243 CCL19Q99731 98 aa18.58■□□□□ 0.57
MSX2-201ENST00000239243 TMEM167BQ9NRX6 74 aa18.58■□□□□ 0.57
MSX2-201ENST00000239243 GATA2P23769 480 aaPredicted RBP18.58■□□□□ 0.56
MSX2-201ENST00000239243 MIR17HGQ75NE6 70 aa18.58■□□□□ 0.56
MSX2-201ENST00000239243 PFDN5Q99471 154 aa18.58■□□□□ 0.56
MSX2-201ENST00000239243 CTDSP1Q9GZU7 261 aa18.58■□□□□ 0.56
MSX2-201ENST00000239243 IGSF10Q6WRI0 2623 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 A0A1W2PRD5 423 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 A0A1W2PRF3 423 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 A0A1W2PRM7 423 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 CNIH1O95406 144 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 ATP5G3P48201 142 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 HES1Q14469 280 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 OR1L4Q8NGR5 311 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 SPOCK3Q9BQ16 436 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 RAB5AP20339 215 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 RND2P52198 227 aa18.57■□□□□ 0.56
MSX2-201ENST00000239243 SSBP2P81877 361 aaPredicted RBP18.57■□□□□ 0.56
MSX2-201ENST00000239243 NAV3Q8IVL0 2385 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms